RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RCC1LQ96I51 464 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 RCHY1Q96PM5 261 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 EFNA2O43921 213 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 TMEM183AQ8IXX5 376 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 A0A1B0GTI1 187 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 H3BRM9 83 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 IGHV1-8P0DP01 117 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 PMCHL1Q16048 86 aa16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 SLC25A39Q9BZJ4 359 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 RPP21Q9H633 154 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-201ENST00000361246 IGHV1-3A0A0C4DH29 117 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 DEFB130BP0DP73 79 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 DEFB130AP0DP74 79 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 FABP2P12104 132 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 NPIPB13A6NJU9 1138 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 TPTE2P1Q5T6R2 138 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 SAMD13Q5VXD3 122 aa16.77■□□□□ 0.27
CDC42BPB-201ENST00000361246 C15orf61A6NNL5 157 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 NAT1P18440 290 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 COPS9Q8WXC6 57 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 ST20Q9HBF5 79 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 GAGE10A6NGK3 116 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 PMCHL2Q9BQD1 86 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 NPDC1Q9NQX5 325 aaPredicted RBP16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 PLSCR2Q9NRY7 297 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 NPIPB5A8MRT5 1133 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 TSPAN13O95857 204 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 ERASQ7Z444 233 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 CD177Q8N6Q3 437 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 SLC25A15Q9Y619 301 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 DANCRP0C864 163 aa16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 MRPL16Q9NX20 251 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-201ENST00000361246 IFI6P09912 130 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 STPG2Q8N412 459 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 LINC00862A6NCI5 91 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 IL18BPO95998 194 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 IGHV4-39P01824 125 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 FAM131CQ96AQ9 280 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 MT-ND6P03923 174 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 NXT2Q9NPJ8 142 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 SPTBN2O15020 2390 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 E7EQL1 145 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 HOXA5P20719 270 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 HIGD1CA8MV81 97 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 GPX4P36969 197 aaPredicted RBP16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 VCX2Q9H322 139 aa16.75■□□□□ 0.27
CDC42BPB-201ENST00000361246 IGKV1-9A0A0C4DH69 117 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 K7ENP7 123 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 KIAA2026Q5HYC2 2103 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 CD28P10747 220 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 ZNF474Q6S9Z5 364 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 TCF23Q7RTU1 214 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 DUSP14O95147 198 aaKnown RBP16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 EXOC3-AS1Q8N2X6 119 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 A0A0A6YYD4 124 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 SYNJ2BPP57105 145 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 PKIAP61925 76 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 SAA4P35542 130 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 ZNF600Q6ZNG1 722 aa16.74■□□□□ 0.27
CDC42BPB-201ENST00000361246 A0A087WX48 190 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 LINC00114Q6XXX2 140 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 A0A1B0GUT8 65 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 ATP5LO75964 103 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 TDGF1P3P51864 188 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 C1orf122Q6ZSJ8 110 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 PUSL1Q8N0Z8 303 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 C5orf63A6NC05 138 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 C21orf62-AS1Q17RA5 79 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 PAPPA-AS1Q5QFB9 102 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 C14orf144Q96I85 54 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 SCRT1Q9BWW7 348 aa16.73■□□□□ 0.27
CDC42BPB-201ENST00000361246 PHLDA1Q8WV24 401 aaPredicted RBP16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 DIDO1Q9BTC0 2240 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 CXorf65A6NEN9 183 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 PRADC1Q9BSG0 188 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 NEUROG3Q9Y4Z2 214 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 PLXND1Q9Y4D7 1925 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 TRAV3A0A0B4J244 114 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 PLP1P60201 277 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 OTORQ9NRC9 128 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 FABP5P3A8MUU1 101 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 DTX2Q86UW9 622 aa16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 SEPSECSQ9HD40 501 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-201ENST00000361246 TRAV21A0A0B4J279 112 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 PMS2P5A8MQ11 134 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 TMEM250H0YL14 139 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 CD8AP01732 235 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 TMEM249Q2WGJ8 235 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 RPUSD1Q9UJJ7 312 aaKnown RBP16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 CA1P00915 261 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 TMEM95Q3KNT9 176 aa16.71■□□□□ 0.27
CDC42BPB-201ENST00000361246 CD200R1LQ6Q8B3 271 aa16.71■□□□□ 0.26
CDC42BPB-201ENST00000361246 LINC00477Q96M19 166 aa16.71■□□□□ 0.26
CDC42BPB-201ENST00000361246 TRBV6-7A0A0A0MS04 114 aa16.7■□□□□ 0.26
CDC42BPB-201ENST00000361246 TYMSP04818 313 aa16.7■□□□□ 0.26
CDC42BPB-201ENST00000361246 MDS2Q8NDY4 140 aa16.7■□□□□ 0.26
CDC42BPB-201ENST00000361246 PGPEP1LA6NFU8 196 aa16.7■□□□□ 0.26
CDC42BPB-201ENST00000361246 OR11H12B2RN74 326 aa16.7■□□□□ 0.26
CDC42BPB-201ENST00000361246 OR11H1Q8NG94 326 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms