RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 TRAV13-1A0A0B4J241 112 aa8.81□□□□□ -1
FXR1-202ENST00000357559 IGHV2OR16-5A0A0B4J2B6 119 aa8.81□□□□□ -1
FXR1-202ENST00000357559 TRBV5-5A0A0J9YX44 114 aa8.81□□□□□ -1
FXR1-202ENST00000357559 IGHV1-2P23083 117 aa8.81□□□□□ -1
FXR1-202ENST00000357559 LIMS1P48059 325 aa8.81□□□□□ -1
FXR1-202ENST00000357559 POC1AQ8NBT0 407 aa8.81□□□□□ -1
FXR1-202ENST00000357559 SAP25Q8TEE9 199 aa8.81□□□□□ -1
FXR1-202ENST00000357559 PLXND1Q9Y4D7 1925 aa8.81□□□□□ -1
FXR1-202ENST00000357559 LY75O60449 1722 aa8.81□□□□□ -1
FXR1-202ENST00000357559 CIARTQ8N365 385 aaPredicted RBP8.81□□□□□ -1
FXR1-202ENST00000357559 SLC25A38Q96DW6 304 aa8.81□□□□□ -1
FXR1-202ENST00000357559 PAX8Q06710 450 aa8.81□□□□□ -1
FXR1-202ENST00000357559 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
FXR1-202ENST00000357559 SAXO1Q8IYX7 474 aa8.81□□□□□ -1
FXR1-202ENST00000357559 SLC25A28Q96A46 364 aa8.81□□□□□ -1
FXR1-202ENST00000357559 TRAV25A0A0B4J276 109 aa8.81□□□□□ -1
FXR1-202ENST00000357559 DEFB130BP0DP73 79 aa8.81□□□□□ -1
FXR1-202ENST00000357559 DEFB130AP0DP74 79 aa8.81□□□□□ -1
FXR1-202ENST00000357559 GAGE13Q4V321 117 aa8.81□□□□□ -1
FXR1-202ENST00000357559 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
FXR1-202ENST00000357559 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
FXR1-202ENST00000357559 C1QTNF9P0C862 333 aa8.81□□□□□ -1
FXR1-202ENST00000357559 CA7P43166 264 aa8.81□□□□□ -1
FXR1-202ENST00000357559 LAGE3Q14657 143 aa8.81□□□□□ -1
FXR1-202ENST00000357559 OTORQ9NRC9 128 aa8.81□□□□□ -1
FXR1-202ENST00000357559 ZNF708P17019 499 aa8.8□□□□□ -1
FXR1-202ENST00000357559 ERCC8Q13216 396 aa8.8□□□□□ -1
FXR1-202ENST00000357559 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.8□□□□□ -1
FXR1-202ENST00000357559 C1orf159Q96HA4 380 aa8.8□□□□□ -1
FXR1-202ENST00000357559 TNFRSF14Q92956 283 aa8.8□□□□□ -1
FXR1-202ENST00000357559 PLAC1Q9HBJ0 212 aa8.8□□□□□ -1
FXR1-202ENST00000357559 GSN-AS1Q9NRJ2 163 aa8.8□□□□□ -1
FXR1-202ENST00000357559 ZNF407Q9C0G0 2248 aa8.8□□□□□ -1
FXR1-202ENST00000357559 ABCA1O95477 2261 aa8.8□□□□□ -1
FXR1-202ENST00000357559 ERVH48-1M5A8F1 160 aa8.8□□□□□ -1
FXR1-202ENST00000357559 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
FXR1-202ENST00000357559 RBMY1FQ15415 496 aaKnown RBP8.8□□□□□ -1
FXR1-202ENST00000357559 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
FXR1-202ENST00000357559 RNF125Q96EQ8 232 aa8.8□□□□□ -1
FXR1-202ENST00000357559 C4orf51C9J302 202 aa8.8□□□□□ -1
FXR1-202ENST00000357559 FCN3O75636 299 aa8.8□□□□□ -1
FXR1-202ENST00000357559 CEACAM8P31997 349 aaPredicted RBP8.8□□□□□ -1
FXR1-202ENST00000357559 ZNF876PQ49A33 203 aa8.8□□□□□ -1
FXR1-202ENST00000357559 IGFL4Q6B9Z1 124 aa8.8□□□□□ -1
FXR1-202ENST00000357559 TRGV11A0A075B6L2 103 aa8.8□□□□□ -1
FXR1-202ENST00000357559 IFITM3Q01628 133 aa8.8□□□□□ -1
FXR1-202ENST00000357559 ATP5L2Q7Z4Y8 100 aa8.8□□□□□ -1
FXR1-202ENST00000357559 LINC00477Q96M19 166 aa8.8□□□□□ -1
FXR1-202ENST00000357559 NYNRINQ9P2P1 1898 aaKnown RBP8.8□□□□□ -1
FXR1-202ENST00000357559 MED12Q93074 2177 aa8.8□□□□□ -1
FXR1-202ENST00000357559 TM4SF5O14894 197 aa8.8□□□□□ -1
FXR1-202ENST00000357559 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
FXR1-202ENST00000357559 VMO1Q7Z5L0 202 aa8.79□□□□□ -1
FXR1-202ENST00000357559 C2orf82Q6UX34 121 aa8.79□□□□□ -1
FXR1-202ENST00000357559 KLHL30-AS1Q8NEE0 82 aa8.79□□□□□ -1
FXR1-202ENST00000357559 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
FXR1-202ENST00000357559 BRD3OSQ6XYD6 125 aa8.79□□□□□ -1
FXR1-202ENST00000357559 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.79□□□□□ -11e-7■■■■■ 33.3
FXR1-202ENST00000357559 F8VVB4 439 aa8.79□□□□□ -1
FXR1-202ENST00000357559 F8VWA3 439 aa8.79□□□□□ -1
FXR1-202ENST00000357559 TCRAP04437 139 aa8.79□□□□□ -1
FXR1-202ENST00000357559 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
FXR1-202ENST00000357559 ZGRF1Q86YA3 2104 aa8.79□□□□□ -1
FXR1-202ENST00000357559 FAM186AA6NE01 2351 aa8.79□□□□□ -1
FXR1-202ENST00000357559 ARID2Q68CP9 1835 aa8.79□□□□□ -1
FXR1-202ENST00000357559 A0A087WWL8 130 aa8.79□□□□□ -1
FXR1-202ENST00000357559 EPOPA6NHQ4 379 aa8.79□□□□□ -1
FXR1-202ENST00000357559 TMEM126AQ9H061 195 aa8.79□□□□□ -1
FXR1-202ENST00000357559 A0A0G2JK05 382 aa8.79□□□□□ -1
FXR1-202ENST00000357559 LEPROTO15243 131 aa8.79□□□□□ -1
FXR1-202ENST00000357559 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
FXR1-202ENST00000357559 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A10PA6NDY2 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A18PA6NE21 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A16PA6NEW6 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A20PA6NIJ5 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A8PA6NJQ4 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A7PA6NKC0 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A22PA8MWA6 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A12PA8MX19 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A5PA8MXJ8 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A23PA8MXZ1 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A15PP0C7V4 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A13PP0C7W8 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A14PP0C7W9 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 FAM90A24PP0C7X0 464 aa8.78□□□□□ -1
FXR1-202ENST00000357559 ZNF479Q96JC4 524 aa8.78□□□□□ -1
FXR1-202ENST00000357559 SPXQ9BT56 116 aa8.78□□□□□ -1
FXR1-202ENST00000357559 PPP1R3EQ9H7J1 279 aa8.78□□□□□ -1
FXR1-202ENST00000357559 RPUSD1Q9UJJ7 312 aaKnown RBP8.78□□□□□ -1
FXR1-202ENST00000357559 NDUFS8O00217 210 aa8.78□□□□□ -1
FXR1-202ENST00000357559 C3orf56Q8N813 242 aa8.78□□□□□ -1
FXR1-202ENST00000357559 SLC25A39Q9BZJ4 359 aaPredicted RBP8.78□□□□□ -1
FXR1-202ENST00000357559 MLNRO43193 412 aa8.78□□□□□ -1
FXR1-202ENST00000357559 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
FXR1-202ENST00000357559 GAGE2BQ13066 116 aa8.78□□□□□ -1
FXR1-202ENST00000357559 SLC50A1Q9BRV3 221 aa8.78□□□□□ -1
FXR1-202ENST00000357559 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
FXR1-202ENST00000357559 TIMM23O14925 209 aa8.78□□□□□ -1
FXR1-202ENST00000357559 THAP8Q8NA92 274 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms