RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 OR9G9P0C7N8 305 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 NPFFR1Q9GZQ6 430 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 SPRR3Q9UBC9 169 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 LY96Q9Y6Y9 160 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 LOC105371267A0A1B0GV96 52 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 C9JCJ5 164 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 H7C2G1 150 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 NMSQ5H8A3 153 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 TMEM170BQ5T4T1 132 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 TEX38Q6PEX7 206 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 NRN1Q9NPD7 142 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 IGHV3-35A0A0C4DH35 117 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 PINLYPA6NC86 204 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 F2Z2F3 143 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 UBE2CO00762 179 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
COL9A1-202ENST00000357250 C8orf46Q8TAG6 207 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
COL9A1-202ENST00000357250 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
COL9A1-202ENST00000357250 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
COL9A1-202ENST00000357250 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.74□□□□□ -0.85
COL9A1-202ENST00000357250 IGHV1-46P01743 117 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 LEPP41159 167 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
COL9A1-202ENST00000357250 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 TSKUQ8WUA8 353 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 GBF1Q92538 1859 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 RAMP3O60896 148 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 FOXL1Q12952 345 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 C7orf69Q9H7B7 122 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 CLPSP04118 112 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 CD59P13987 128 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 TMEM14EPQ6UXP3 125 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 PSG8Q9UQ74 426 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 TRAV8-6A0A0B4J262 113 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 SERF1AO75920 110 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 THBDP07204 575 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
COL9A1-202ENST00000357250 TICRRQ7Z2Z1 1910 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 PF4P02776 101 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 WFDC1Q9HC57 220 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 PNRC2Q9NPJ4 139 aaKnown RBP9.73□□□□□ -0.85
COL9A1-202ENST00000357250 JKAMPQ9P055 326 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 WISP1O95388 367 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 HBDP02042 147 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 GATA2P23769 480 aaPredicted RBP9.73□□□□□ -0.85
COL9A1-202ENST00000357250 FOXG1P55316 489 aaPredicted RBP9.73□□□□□ -0.85
COL9A1-202ENST00000357250 SRSF6Q13247 344 aaKnown RBP9.73□□□□□ -0.85
COL9A1-202ENST00000357250 FGFBP3Q8TAT2 258 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 FOXC2Q99958 501 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 GHRHP01286 108 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 C1QTNF9P0C862 333 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 ORMDL2Q53FV1 153 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 GGTLC1Q9BX51 225 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 PLXND1Q9Y4D7 1925 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 ACACBO00763 2458 aa9.73□□□□□ -0.85
COL9A1-202ENST00000357250 LOC102724200A0A096LPH7 203 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-202ENST00000357250 OVOL1O14753 267 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 DSCR9P59020 149 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 FOXF2Q12947 444 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 MINOS1Q5TGZ0 78 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 OCC1Q8TAD7 63 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 PRSS22Q9GZN4 317 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 MINOS1-NBL1R4GNA1 71 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BKO60814 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BJP06899 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BOP23527 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BBP33778 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BDP58876 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BCP62807 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST2H2BEQ16778 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-202ENST00000357250 FAM71F2Q6NXP2 309 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 ASCL4Q6XD76 172 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BHQ93079 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BNQ99877 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 HIST1H2BMQ99879 126 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 IGHV3OR16-13A0A075B7E8 117 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 IGHV3-74A0A0B4J1X5 117 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 LYL1P12980 280 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 QRFPP83859 136 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 SLC25A48Q6ZT89 311 aaKnown RBP9.72□□□□□ -0.85
COL9A1-202ENST00000357250 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 C5orf30Q96GV9 206 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 AGMATQ9BSE5 352 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
COL9A1-202ENST00000357250 ITGB1BP1O14713 200 aa9.71□□□□□ -0.85
COL9A1-202ENST00000357250 OR5AN1Q8NGI8 311 aa9.71□□□□□ -0.85
COL9A1-202ENST00000357250 C18orf15Q96N68 181 aa9.71□□□□□ -0.85
COL9A1-202ENST00000357250 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.85
COL9A1-202ENST00000357250 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.85
COL9A1-202ENST00000357250 CD55P08174 381 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms