RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MIEN1Q9BRT3 115 aa14.58□□□□□ -0.08
PTP4A3-202ENST00000349124 SAP30LQ9HAJ7 183 aa14.58□□□□□ -0.08
PTP4A3-202ENST00000349124 PTPRZ1P23471 2315 aaPredicted RBP14.58□□□□□ -0.08
PTP4A3-202ENST00000349124 TRBV9A0A0B4J1U6 114 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 NKX6-3A6NJ46 265 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 DIRC3C9JPN6 131 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 AMY1AP04745 511 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 NTF3P20783 257 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 IGFL3Q6UXB1 125 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 ZNF329Q86UD4 541 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 C19orf24Q9BVV8 132 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 SSBP4Q9BWG4 385 aaPredicted RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 CTSZQ9UBR2 303 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 LRBAP50851 2863 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 A0A0G2JNJ9 132 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 ENSAO43768 121 aaKnown RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 FSTL3O95633 263 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 PRB4P10163 310 aaPredicted RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 ZNF25P17030 456 aaPredicted RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 USF1P22415 310 aaPredicted RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 C3orf36Q3SXR2 165 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 TMEM108Q6UXF1 575 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 NUDT10Q8NFP7 164 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 OR4C13Q8NGP0 309 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 NUDT11Q96G61 164 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 C20orf144Q9BQM9 153 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 Q9UFV3 132 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 RPH3ALQ9UNE2 315 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 VWC2LB2RUY7 222 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 APCSP02743 223 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 MFAP2P55001 183 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 WDR73Q6P4I2 378 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 TMEM167AQ8TBQ9 72 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 WNT10AQ9GZT5 417 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 GSX1Q9H4S2 264 aaPredicted RBP14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 PPIAL4AQ9Y536 164 aa14.57□□□□□ -0.08
PTP4A3-202ENST00000349124 A0A1W2PPI3 338 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 C22orf46C9J442 243 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 THBDP07204 575 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 TNFRSF1AP19438 455 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 LEMD1Q68G75 181 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 LINC00305Q7Z4B0 112 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 ATOH7Q8N100 152 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 FXYD5Q96DB9 178 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 PPIAL4EA0A075B759 164 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 A0A1W2PN81 502 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 PPIAL4DF5H284 164 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 PPIAL4FP0DN26 164 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 CNTFRP26992 372 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 TMEM183BQ1AE95 376 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 MRGPRG-AS1Q2M3A8 158 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 NIT1Q86X76 327 aa14.56□□□□□ -0.08
PTP4A3-202ENST00000349124 IZUMO1RA6ND01 250 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 TMEM178BH3BS89 294 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 PEX7O00628 323 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 CD24P25063 80 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 LCN12Q6JVE5 192 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 NUP35Q8NFH5 326 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 FAM57AQ8TBR7 257 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 TSKUQ8WUA8 353 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 MRPL32Q9BYC8 188 aaKnown RBP14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 ZNF586Q9NXT0 402 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 TCRBV4S1A1TA0A5B7 111 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 C16orf97H3BN30 126 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 MT-ND6P03923 174 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 CAMPP49913 170 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 MAJINQ3KP22 176 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 NUP37Q8NFH4 326 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 ST6GALNAC6Q969X2 333 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 KCNS1Q96KK3 526 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 TMEM68Q96MH6 324 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 ZNF331Q9NQX6 463 aaPredicted RBP14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 DCHS2Q6V1P9 2916 aa14.55□□□□□ -0.08
PTP4A3-202ENST00000349124 MALRD1Q5VYJ5 2156 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 C3orf79P0CE67 100 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 ATP5IP56385 69 aaPredicted RBP14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 MEF2CQ06413 473 aaPredicted RBP14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 SPACA3Q8IXA5 215 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 OR1B1Q8NGR6 318 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 SVEP1Q4LDE5 3571 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 KLK10O43240 276 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 ZNF324O75467 553 aaPredicted RBP14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 TFPI2P48307 235 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 OR10J3Q5JRS4 329 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 LINC00322Q6ZN03 302 aaPredicted RBP14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 MBD6Q96DN6 1003 aa14.54□□□□□ -0.08
PTP4A3-202ENST00000349124 HLA-DQA1P01909 254 aa14.53□□□□□ -0.08
PTP4A3-202ENST00000349124 C18orf32Q8TCD1 76 aa14.53□□□□□ -0.08
PTP4A3-202ENST00000349124 PGPA6NDG6 321 aa14.52□□□□□ -0.08
PTP4A3-202ENST00000349124 NDUFB3O43676 98 aa14.52□□□□□ -0.08
PTP4A3-202ENST00000349124 BTF3P20290 206 aaKnown RBP14.52□□□□□ -0.08
PTP4A3-202ENST00000349124 LOXP28300 417 aaPredicted RBP14.52□□□□□ -0.08
PTP4A3-202ENST00000349124 TNXAQ16473 311 aa14.52□□□□□ -0.08
PTP4A3-202ENST00000349124 TBR1Q16650 682 aa14.52□□□□□ -0.09
PTP4A3-202ENST00000349124 Q71RC1 249 aaPredicted RBP14.52□□□□□ -0.09
PTP4A3-202ENST00000349124 TNFRSF19Q9NS68 423 aa14.52□□□□□ -0.09
PTP4A3-202ENST00000349124 WASHC3Q9Y3C0 194 aa14.52□□□□□ -0.09
PTP4A3-202ENST00000349124 HIGD1CA8MV81 97 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 FAM87AP0C7U9 286 aa14.51□□□□□ -0.09
PTP4A3-202ENST00000349124 TMEM30BQ3MIR4 351 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms