RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 SLC35E3Q7Z769 313 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 SCRT1Q9BWW7 348 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 SMDT1Q9H4I9 107 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 TRAV41A0A0B4J266 112 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 GATA2P23769 480 aaPredicted RBP17.29■□□□□ 0.36
CACNB1-201ENST00000344140 NPBWR1P48145 328 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 PMS2P11Q13670 270 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 ZNF48Q96MX3 618 aaPredicted RBP17.29■□□□□ 0.36
CACNB1-201ENST00000344140 TMEM231Q9H6L2 316 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 VPREB3Q9UKI3 123 aa17.29■□□□□ 0.36
CACNB1-201ENST00000344140 RBFOX3A6NFN3 312 aa17.28■□□□□ 0.36
CACNB1-201ENST00000344140 G3V318 75 aa17.28■□□□□ 0.36
CACNB1-201ENST00000344140 IGLC1P0CG04 106 aa17.28■□□□□ 0.36
CACNB1-201ENST00000344140 MFAP4P55083 255 aa17.28■□□□□ 0.36
CACNB1-201ENST00000344140 TMEM218A2RU14 115 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 HMGB3O15347 200 aaKnown RBP17.27■□□□□ 0.36
CACNB1-201ENST00000344140 OR2J3O76001 311 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 FABP1P07148 127 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 KRTAP1-1Q07627 177 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 C19orf54Q5BKX5 351 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 GATAD1Q8WUU5 269 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 LINC00052Q96N35 136 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 RNF2Q99496 336 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 FBXL7Q9UJT9 491 aa17.27■□□□□ 0.36
CACNB1-201ENST00000344140 TRAV30A0A087WSZ9 112 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 BLCAPP62952 87 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 OR1L4Q8NGR5 311 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 VN1R17PQ8TDU5 208 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 PFDN5Q99471 154 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 C21orf62Q9NYP8 219 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 GNG13Q9P2W3 67 aa17.27■□□□□ 0.35
CACNB1-201ENST00000344140 TRBV9A0A0B4J1U6 114 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 NDUFB8O95169 186 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 IFNA1P01562 189 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 CD99P14209 185 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 SEPSECSQ9HD40 501 aaKnown RBP17.26■□□□□ 0.35
CACNB1-201ENST00000344140 DNAJC4Q9NNZ3 241 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 ZNF355PQ9NSJ1 428 aa17.26■□□□□ 0.35
CACNB1-201ENST00000344140 AP4M1O00189 453 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 EIF3GO75821 320 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNB1-201ENST00000344140 OR5G3P0C626 314 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 STAG3L2P0CL84 134 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 STAG3L3P0CL85 134 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 HAGHQ16775 308 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 FAM78BQ5VT40 261 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 RBMS3Q6XE24 437 aaKnown RBP17.25■□□□□ 0.35
CACNB1-201ENST00000344140 NECAP1Q8NC96 275 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 TXN2Q99757 166 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 ZNF580Q9UK33 172 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 FUT9Q9Y231 359 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 OTOGQ6ZRI0 2925 aa17.25■□□□□ 0.35
CACNB1-201ENST00000344140 ZNF469Q96JG9 3925 aaPredicted RBP17.25■□□□□ 0.35
CACNB1-201ENST00000344140 PSMB11A5LHX3 300 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 SRP14P37108 136 aaKnown RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 ZNF506Q5JVG8 444 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 MRPL32Q9BYC8 188 aaKnown RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 TLN2Q9Y4G6 2542 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 ELOA3CA0A087WX78 387 aaPredicted RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 GNG7O60262 68 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 COX7A2P2O60397 106 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 SCGB2A1O75556 95 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 CXorf1O96002 111 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 FCGR2BP31994 310 aaPredicted RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 TAGLN2P37802 199 aaKnown RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 PSMB3P49720 205 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 PPT1P50897 306 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 RHOGP84095 191 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 KHDC3LQ587J8 217 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 RARRES2Q99969 163 aa17.24■□□□□ 0.35
CACNB1-201ENST00000344140 GSX1Q9H4S2 264 aaPredicted RBP17.24■□□□□ 0.35
CACNB1-201ENST00000344140 HOXA3O43365 443 aaPredicted RBP17.23■□□□□ 0.35
CACNB1-201ENST00000344140 IGKV1-17P01599 117 aa17.23■□□□□ 0.35
CACNB1-201ENST00000344140 BCL2P10415 239 aa17.23■□□□□ 0.35
CACNB1-201ENST00000344140 TMEM37Q8WXS4 190 aa17.23■□□□□ 0.35
CACNB1-201ENST00000344140 YAE1D1Q9NRH1 226 aa17.23■□□□□ 0.35
CACNB1-201ENST00000344140 LOC102723971A0A1B0GUV8 181 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 BRI3O95415 125 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 HNF1AP20823 631 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 TAS2R45P59539 299 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 PLP1P60201 277 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 C15orf32Q32M92 178 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 TIGITQ495A1 244 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 Q56UQ5 140 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 MANBALQ9NQG1 85 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 TECRQ9NZ01 308 aaKnown RBP17.22■□□□□ 0.35
CACNB1-201ENST00000344140 C9JQL5 133 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 H3BUA1 57 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 SFTA3P0C7M3 94 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 RD3LP0DJH9 198 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 ARL14EPLP0DKL9 152 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 FOSL1P15407 271 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 C10orf113Q5VZT2 155 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 SPATA31B1PQ5VZV4 182 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 IL17RELQ6ZVW7 336 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 IQCF2Q8IXL9 164 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 TMPRSS5Q9H3S3 457 aa17.22■□□□□ 0.35
CACNB1-201ENST00000344140 HSPB1P04792 205 aaKnown RBP17.21■□□□□ 0.35
CACNB1-201ENST00000344140 PSG1P11464 419 aa17.21■□□□□ 0.35
CACNB1-201ENST00000344140 YPEL3P61236 119 aaPredicted RBP17.21■□□□□ 0.35
CACNB1-201ENST00000344140 ICAM4Q14773 271 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms