RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 ACY3Q96HD9 319 aa11.67□□□□□ -0.54
TNFRSF12A-202ENST00000341627 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
TNFRSF12A-202ENST00000341627 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
TNFRSF12A-202ENST00000341627 PSENENQ9NZ42 101 aa11.67□□□□□ -0.54
TNFRSF12A-202ENST00000341627 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 H3BP45 60 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 PTTG1O95997 202 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 OR10J1P30954 320 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 TIGITQ495A1 244 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
TNFRSF12A-202ENST00000341627 TRAV14DV4A0A0A6YYC5 116 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 L7N2F9 121 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 MBPP02686 304 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 BMI1P35226 326 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 TAS2R30P59541 319 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 VAMP2P63027 116 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 Q8WTZ3 238 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 MLXQ9UH92 298 aa11.65□□□□□ -0.54
TNFRSF12A-202ENST00000341627 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IGHV7-4-1A0A0J9YVY3 117 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TSC22D2O75157 780 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 GAMTQ14353 236 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 GUCA2BQ16661 112 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SMPXQ9UHP9 88 aa11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 LSM5Q9Y4Y9 91 aaKnown RBP11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
TNFRSF12A-202ENST00000341627 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 GOSR2O14653 212 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SSNA1O43805 119 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 FABP1P07148 127 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 PVALBP20472 110 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 PAX9P55771 341 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 METTL26Q96S19 204 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SMAD5-AS1Q9Y6J3 95 aa11.63□□□□□ -0.55
TNFRSF12A-202ENST00000341627 COL7A1Q02388 2944 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 K7EPK0 472 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TOMM40O96008 361 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RD3LP0DJH9 198 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 S100A10P60903 97 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TMEM14EPQ6UXP3 125 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 WDR89Q96FK6 387 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
TNFRSF12A-202ENST00000341627 A0A1W2PS18 150 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 PRSS46E5RG02 174 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 CHEK1O14757 476 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SCAF4O95104 1147 aaKnown RBP11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 NPPCP23582 126 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 CYCSP99999 105 aaKnown RBP11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 AKR1C1Q04828 323 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 ACOT7LQ6ZUV0 252 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 CD5P06127 495 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 BCAP31P51572 246 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 CD81P60033 236 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IL15RAQ13261 267 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TRGV9Q99603 122 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SPAG8Q99932 426 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 NMES1Q9C002 83 aa11.6□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IGHV3OR16-13A0A075B7E8 117 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IGHV3-74A0A0B4J1X5 117 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 TSPAN4O14817 238 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 SIX6O95475 246 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 IL4P05112 153 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 PSG1P11464 419 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 CAV2P51636 162 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 DLK1P80370 383 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RAB32Q13637 225 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RGS21Q2M5E4 152 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 Q8N1Y9 231 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 THAP8Q8NA92 274 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 GRAMD2BQ96HH9 432 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 RNF2Q99496 336 aa11.59□□□□□ -0.55
TNFRSF12A-202ENST00000341627 NEURL2Q9BR09 285 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms