RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 TMEM116Q8NCL8 245 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 MRPL36Q9P0J6 103 aaKnown RBP13.62□□□□□ -0.23
CLDN4-201ENST00000340958 FBXL7Q9UJT9 491 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 MXRA5Q9NR99 2828 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 JMJD1CQ15652 2540 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 RIPPLY3P57055 190 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 UQCC3Q6UW78 93 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 LCN15Q6UWW0 184 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 FANCD2OSQ96PS1 177 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 SLC25A22Q9H936 323 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 S4R3C0 116 aa13.62□□□□□ -0.23
CLDN4-201ENST00000340958 TCRBV4S1A1TA0A5B7 111 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 NUDT19A8MXV4 375 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 K7EIM0 57 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 AP4M1O00189 453 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 CRLF1O75462 422 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 HBE1P02100 147 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 GATA2P23769 480 aaPredicted RBP13.61□□□□□ -0.23
CLDN4-201ENST00000340958 Q56UQ5 140 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 IL34Q6ZMJ4 242 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 OR4X1Q8NH49 305 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
CLDN4-201ENST00000340958 MS4A10Q96PG2 267 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 DUX5Q96PT3 197 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 TMEM160Q9NX00 188 aa13.61□□□□□ -0.23
CLDN4-201ENST00000340958 RAB19A4D1S5 217 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 SCGB2A1O75556 95 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 IGF1P05019 195 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 NPBWR1P48145 328 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 CDC34P49427 236 aaPredicted RBP13.6□□□□□ -0.23
CLDN4-201ENST00000340958 MFAP4P55083 255 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 DEFA5Q01523 94 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 ZNF90Q03938 601 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 GCSAMLQ5JQS6 135 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 IQCF2Q8IXL9 164 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 RPP25LQ8N5L8 163 aaKnown RBP13.6□□□□□ -0.23
CLDN4-201ENST00000340958 NOL4LQ96MY1 436 aaPredicted RBP13.6□□□□□ -0.23
CLDN4-201ENST00000340958 NPFFR1Q9GZQ6 430 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 HMGB3O15347 200 aaKnown RBP13.6□□□□□ -0.23
CLDN4-201ENST00000340958 GNG7O60262 68 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 NDUFB8O95169 186 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 SELENOTP62341 195 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 RHOGP84095 191 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
CLDN4-201ENST00000340958 CTXND1A0A1B0GTU2 59 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 MAP1LC3B2A6NCE7 125 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 NUPL2O15504 423 aaKnown RBP13.59□□□□□ -0.23
CLDN4-201ENST00000340958 CLN5O75503 358 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 YIF1AO95070 293 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 IGHV3-23P01764 117 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 FABP1P07148 127 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 LINC00869P0C866 280 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRR20EP86478 221 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRR20CP86479 221 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRR20DP86480 221 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRR20BP86481 221 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRR20AP86496 221 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 Q6ZS46 218 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 TRGV9Q99603 122 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 PRSS22Q9GZN4 317 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 MAP1LC3BQ9GZQ8 125 aa13.59□□□□□ -0.23
CLDN4-201ENST00000340958 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.24
CLDN4-201ENST00000340958 EIF3GO75821 320 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLDN4-201ENST00000340958 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
CLDN4-201ENST00000340958 COMMD1Q8N668 190 aa13.58□□□□□ -0.24
CLDN4-201ENST00000340958 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
CLDN4-201ENST00000340958 CDC42EP3Q9UKI2 254 aa13.58□□□□□ -0.24
CLDN4-201ENST00000340958 CRIP2P52943 208 aaPredicted RBP13.57□□□□□ -0.24
CLDN4-201ENST00000340958 RHOBP62745 196 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 LYPD6BQ8NI32 183 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 RAB24Q969Q5 203 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
CLDN4-201ENST00000340958 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
CLDN4-201ENST00000340958 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
CLDN4-201ENST00000340958 DOK5Q9P104 306 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 TRAV30A0A087WSZ9 112 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 COX7A2P2O60397 106 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 TIGITQ495A1 244 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 VN1R17PQ8TDU5 208 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 MBD3L1Q8WWY6 194 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 TREM1Q9NP99 234 aa13.57□□□□□ -0.24
CLDN4-201ENST00000340958 TMEM218A2RU14 115 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 TRGV3P03979 118 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 SRD5A1P18405 259 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 ATP5G2Q06055 141 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 FAM74A3Q4VXF1 159 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 FAM78BQ5VT40 261 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 SSX7Q7RTT5 188 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 TMEM86BQ8N661 226 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 CLRN3Q8NCR9 226 aa13.56□□□□□ -0.24
CLDN4-201ENST00000340958 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms