RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 ADTRPQ96IZ2 230 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 MYO18BQ8IUG5 2567 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 PTPRBP23467 1997 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-201ENST00000340437 CD69Q07108 199 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
CPSF7-201ENST00000340437 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 M0R2Z0 102 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 GUSBP1Q15486 140 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 C11orf52Q96A22 123 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-201ENST00000340437 TNXAQ16473 311 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
CPSF7-201ENST00000340437 SFXN3Q9BWM7 321 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 DYNLRB1Q9NP97 96 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 TPSG1Q9NRR2 321 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 MRPL36Q9P0J6 103 aaKnown RBP11.68□□□□□ -0.54
CPSF7-201ENST00000340437 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 PGPA6NDG6 321 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 RPUSD1Q9UJJ7 312 aaKnown RBP11.68□□□□□ -0.54
CPSF7-201ENST00000340437 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 SLC25A2Q9BXI2 301 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 FNDC4Q9H6D8 234 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-201ENST00000340437 OSTCQ9NRP0 149 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
CPSF7-201ENST00000340437 DLEU1O43261 78 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 CGB3P0DN86 165 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 CGB7P0DN87 165 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 PPOXP50336 477 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 RNF2Q99496 336 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 SIAH2O43255 324 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 LHBP01229 141 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 Q0VG73 95 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 PLA2G2CQ5R387 149 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 TIMM23BQ5SRD1 257 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 RITA1Q96K30 269 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 K7EM74 188 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 CSN3P07498 182 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 COMPP49747 757 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-201ENST00000340437 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 C20orf144Q9BQM9 153 aa11.67□□□□□ -0.54
CPSF7-201ENST00000340437 DLL1O00548 723 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 NKX6-3A6NJ46 265 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 M0QZK8 103 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 MT-ND6P03923 174 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 SLC25A48Q6ZT89 311 aaKnown RBP11.66□□□□□ -0.54
CPSF7-201ENST00000340437 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 PEX7O00628 323 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 RUSC1-AS1Q66K80 236 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 C1orf174Q8IYL3 243 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 OR4B1Q8NGF8 309 aa11.66□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF430Q9H8G1 570 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-201ENST00000340437 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF714Q96N38 554 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 USP9YO00507 2555 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ARHGAP32A7KAX9 2087 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 CD40P25942 277 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF788Q6ZQV5 615 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 STPG4Q8N801 248 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF138P52744 262 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 TBR1Q16650 682 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 PATE2Q6UY27 113 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-201ENST00000340437 C18orf32Q8TCD1 76 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 IGFBPL1Q8WX77 278 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 ARL2-SNX15V9GYD0 113 aa11.65□□□□□ -0.54
CPSF7-201ENST00000340437 TRAV9-1A0A075B6T8 112 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 TRAV8-1A0A0A6YYK1 113 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 TCTAP57738 103 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 TMEM200BQ69YZ2 307 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms