RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 U3KQ87 197 aa11.38□□□□□ -0.59
PRKN-201ENST00000338468 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 IFNA10P01566 189 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 OR4E1P0C645 316 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 DHRS2Q13268 280 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 ST8SIA2Q92186 375 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 VSIRQ9H7M9 311 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 ZMAT4Q9H898 229 aa11.37□□□□□ -0.59
PRKN-201ENST00000338468 CENPXA8MT69 81 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 MPTX1A8MV57 137 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 LYRM1O43325 122 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 ADAP1O75689 374 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 SLC25A4P12235 298 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 LYG2Q86SG7 212 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 GINS3Q9BRX5 216 aa11.36□□□□□ -0.59
PRKN-201ENST00000338468 TRAV30A0A087WSZ9 112 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 FAM90A26D6RGX4 464 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 IAPPP10997 89 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 NOXA1Q86UR1 476 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 OR1S2Q8NGQ3 325 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 CCDC32Q9BV29 185 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 RETNQ9HD89 108 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 UBQLN2Q9UHD9 624 aa11.35□□□□□ -0.59
PRKN-201ENST00000338468 IGHV3-66A0A0C4DH42 116 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 CRYBB3P26998 211 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 OR10J1P30954 320 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 ACY3Q96HD9 319 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
PRKN-201ENST00000338468 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
PRKN-201ENST00000338468 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
PRKN-201ENST00000338468 ID3Q02535 119 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 C4orf46Q504U0 113 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 U3KQE9 123 aa11.33□□□□□ -0.6
PRKN-201ENST00000338468 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 IGKV1D-37A0A075B6S9 117 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 SYNGR2O43760 224 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 DFFBO76075 338 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 TCRBP04435 133 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 IFNA4P05014 189 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 NPPCP23582 126 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
PRKN-201ENST00000338468 GAMTQ14353 236 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 MITD1Q8WV92 249 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
PRKN-201ENST00000338468 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 WRBO00258 174 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 MED6O75586 246 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 TFPI2P48307 235 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 USF2Q15853 346 aaPredicted RBP11.31□□□□□ -0.6
PRKN-201ENST00000338468 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 Q8WTZ3 238 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 S100ZQ8WXG8 99 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 METTL26Q96S19 204 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
PRKN-201ENST00000338468 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
PRKN-201ENST00000338468 TOMM40O96008 361 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 PSG1P11464 419 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRKN-201ENST00000338468 ZNF124Q15973 351 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
PRKN-201ENST00000338468 MS4A6AQ9H2W1 248 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 LYSTQ99698 3801 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
PRKN-201ENST00000338468 TRAV6A0A075B6T7 132 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 IL4P05112 153 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 CD5P06127 495 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 BMI1P35226 326 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 P2RY1P47900 373 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 IFITM3Q01628 133 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 ZNF90Q03938 601 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 MAP6D1Q9H9H5 199 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
PRKN-201ENST00000338468 STARD9Q9P2P6 4700 aa11.28□□□□□ -0.6
PRKN-201ENST00000338468 A0A1W2PS18 150 aa11.28□□□□□ -0.6
PRKN-201ENST00000338468 H3BP45 60 aa11.28□□□□□ -0.6
PRKN-201ENST00000338468 IFNA21P01568 189 aa11.28□□□□□ -0.6
PRKN-201ENST00000338468 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
PRKN-201ENST00000338468 PAX9P55771 341 aa11.28□□□□□ -0.6
PRKN-201ENST00000338468 RAB11AP62491 216 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms