RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GLMPQ8WWB7 406 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 MAP1LC3AQ9H492 121 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 LINC00473A8K010 186 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 EMP1P54849 157 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 LINC00205P59089 165 aa12.31□□□□□ -0.44
C9orf47-201ENST00000334490 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 ASIPP42127 132 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 SUPT4H1P63272 117 aaKnown RBP12.3□□□□□ -0.44
C9orf47-201ENST00000334490 IGFL2Q6UWQ7 119 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 Q96MF0 132 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 MRPL18Q9H0U6 180 aaKnown RBP12.3□□□□□ -0.44
C9orf47-201ENST00000334490 MBNL3Q9NUK0 354 aaKnown RBP12.3□□□□□ -0.44
C9orf47-201ENST00000334490 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 SLC50A1Q9BRV3 221 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 CBY3A6NI87 242 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
C9orf47-201ENST00000334490 KIF26AQ9ULI4 1882 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-201ENST00000334490 NUDT3O95989 172 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 IGKV1-5P01602 117 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 GATA4P43694 442 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 STHQ8IWL8 128 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 PYYP10082 97 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 KIR3DL3Q8N743 410 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 ARFGEF3Q5TH69 2177 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 PRB1P04280 392 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
C9orf47-201ENST00000334490 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
C9orf47-201ENST00000334490 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
C9orf47-201ENST00000334490 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
C9orf47-201ENST00000334490 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 KLK15Q9H2R5 256 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 SIGLEC9Q9Y336 463 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 IGF2RP11717 2491 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 VENTXO95231 258 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 HTN3P15516 51 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 TGIF2-C20orf24A0A0A6YYL0 155 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 GATA3P23771 443 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 MYO18BQ8IUG5 2567 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 GRIFINA4D1Z8 144 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 BIVMQ86UB2 503 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
C9orf47-201ENST00000334490 CRXO43186 299 aaPredicted RBP12.27□□□□□ -0.44
C9orf47-201ENST00000334490 GRNP28799 593 aaKnown RBP12.27□□□□□ -0.44
C9orf47-201ENST00000334490 SRIP30626 198 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 Q8TCH9 128 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 OTORQ9NRC9 128 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 MED13Q9UHV7 2174 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 OR4C46A6NHA9 309 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 EFNB3Q15768 340 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 VN1R17PQ8TDU5 208 aa12.27□□□□□ -0.44
C9orf47-201ENST00000334490 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
C9orf47-201ENST00000334490 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.45
C9orf47-201ENST00000334490 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
C9orf47-201ENST00000334490 ZNRD1Q9P1U0 126 aa12.27□□□□□ -0.45
C9orf47-201ENST00000334490 RPL13AP40429 203 aaKnown RBP12.26□□□□□ -0.45
C9orf47-201ENST00000334490 TCTAP57738 103 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 DENND4CQ5VZ89 1909 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 TEX38Q6PEX7 206 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 OR1N2Q8NGR9 330 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 CXorf65A6NEN9 183 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 M0R3E3 92 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 SLC17A3O00476 420 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 SAP30O75446 220 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-201ENST00000334490 GNG5P63218 68 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-201ENST00000334490 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 Q6ZS49 121 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 CIARTQ8N365 385 aaPredicted RBP12.26□□□□□ -0.45
C9orf47-201ENST00000334490 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 TRGV2A0A075B6R0 118 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 CD33P20138 364 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 A0A1B0GWJ7 208 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 PSG1P11464 419 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 AREGP15514 252 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 UBE2E1P51965 193 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 HBBP68871 147 aa12.26□□□□□ -0.45
C9orf47-201ENST00000334490 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
C9orf47-201ENST00000334490 LMO1P25800 156 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
C9orf47-201ENST00000334490 TAS2R60P59551 318 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms