RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TRAV5A0A0B4J249 113 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 C22orf46C9J442 243 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 LY6LH3BQJ8 138 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 REG1AP05451 166 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 RD3LP0DJH9 198 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 IER3P46695 156 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 MFAP2P55001 183 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 UCNP55089 124 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
CCDC172-201ENST00000333254 CT83Q5H943 113 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 LINC00305Q7Z4B0 112 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 MRPL52Q86TS9 123 aaKnown RBP8.6□□□□□ -1.03
CCDC172-201ENST00000333254 PPP1R27Q86WC6 154 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 ST6GALNAC3Q8NDV1 305 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 GRAMD2BQ96HH9 432 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 C7orf69Q9H7B7 122 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
CCDC172-201ENST00000333254 TMEM14CQ9P0S9 112 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 INSIG2Q9Y5U4 225 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 AKAP13Q12802 2813 aa8.6□□□□□ -1.03
CCDC172-201ENST00000333254 TEX22C9J3V5 150 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 TNXAQ16473 311 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 ZNF672Q499Z4 452 aaPredicted RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 MUC15Q8N387 334 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 RITA1Q96K30 269 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 C2orf88Q9BSF0 95 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 PRO1933Q9H354 126 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 LOC400499M0QZD8 3231 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 APC2O95996 2303 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 PPIAL4CA0A0B4J2A2 164 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 TRBV6-1A0A0K0K1D8 114 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 ZNF705GA8MUZ8 300 aaPredicted RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 ENSAO43768 121 aaKnown RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 NUPR1O60356 82 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 HYPMO75409 117 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 LIPFP07098 398 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 PPIAL4GP0DN37 164 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 PYYP10082 97 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 HIST1H1EP10412 219 aaKnown RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 GP9P14770 177 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 COL8A2P25067 703 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 BRS3P32247 399 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 FOXC1Q12948 553 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 BAGE2Q86Y30 109 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 LINC00469Q8N7U9 141 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 OR11H6Q8NGC7 330 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 OR8B3Q8NGG8 313 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 OR8B2Q96RD0 313 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 NAT8BQ9UHF3 227 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
CCDC172-201ENST00000333254 SOX21Q9Y651 276 aaPredicted RBP8.59□□□□□ -1.03
CCDC172-201ENST00000333254 PKDREJQ9NTG1 2253 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 GRIFINA4D1Z8 144 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 SERF1AO75920 110 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 MGST1P10620 155 aaKnown RBP8.58□□□□□ -1.04
CCDC172-201ENST00000333254 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 RPEQ96AT9 228 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 ATG101Q9BSB4 218 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 MLST8Q9BVC4 326 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 SCNM1Q9BWG6 230 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 MRPL27Q9P0M9 148 aaKnown RBP8.58□□□□□ -1.04
CCDC172-201ENST00000333254 RNF24Q9Y225 148 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 PLXNB1O43157 2135 aa8.58□□□□□ -1.04
CCDC172-201ENST00000333254 ROS1P08922 2347 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 MUC6Q6W4X9 2439 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 M0R1W7 72 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 OR2J3O76001 311 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 TOMM40O96008 361 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 USF2Q15853 346 aaPredicted RBP8.57□□□□□ -1.04
CCDC172-201ENST00000333254 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 SRSF12Q8WXF0 261 aaKnown RBP8.57□□□□□ -1.04
CCDC172-201ENST00000333254 MISP3Q96FF7 219 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 GPR82Q96P67 336 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 ZNF331Q9NQX6 463 aaPredicted RBP8.57□□□□□ -1.04
CCDC172-201ENST00000333254 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
CCDC172-201ENST00000333254 ZFHX4Q86UP3 3567 aa8.57□□□□□ -1.04
CCDC172-201ENST00000333254 A0A1B0GUS0 222 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 I3L2K1 104 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 BMPR1BO00238 502 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 NDUFA3O95167 84 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 MOSP00540 346 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 PLAUP00749 431 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 UBE2G1P62253 170 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 FXYD3Q14802 87 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 TPTE2P1Q5T6R2 138 aa8.56□□□□□ -1.04
CCDC172-201ENST00000333254 Q6ZWC4 215 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms