RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TMEM147Q9BVK8 224 aa18.34■□□□□ 0.53
TSEN54-201ENST00000333213 NDUFS6O75380 124 aaKnown RBP18.33■□□□□ 0.53
TSEN54-201ENST00000333213 MDKP21741 143 aaPredicted RBP18.33■□□□□ 0.53
TSEN54-201ENST00000333213 ABHD5Q8WTS1 349 aa18.33■□□□□ 0.53
TSEN54-201ENST00000333213 WDR61Q9GZS3 305 aaKnown RBP18.33■□□□□ 0.53
TSEN54-201ENST00000333213 RPS10P46783 165 aaKnown RBP18.33■□□□□ 0.52
TSEN54-201ENST00000333213 KIAA0141Q14154 515 aaPredicted RBP18.33■□□□□ 0.52
TSEN54-201ENST00000333213 SLC25A24Q6NUK1 477 aa18.33■□□□□ 0.52
TSEN54-201ENST00000333213 FNDC4Q9H6D8 234 aaPredicted RBP18.33■□□□□ 0.52
TSEN54-201ENST00000333213 TNFRSF19Q9NS68 423 aa18.33■□□□□ 0.52
TSEN54-201ENST00000333213 PITPNC1Q9UKF7 332 aa18.33■□□□□ 0.52
TSEN54-201ENST00000333213 F11RQ9Y624 299 aaKnown RBP18.33■□□□□ 0.52
TSEN54-201ENST00000333213 ATP6V0E1O15342 81 aa18.32■□□□□ 0.52
TSEN54-201ENST00000333213 CDX1P47902 265 aaPredicted RBP18.32■□□□□ 0.52
TSEN54-201ENST00000333213 BLCAPP62952 87 aa18.32■□□□□ 0.52
TSEN54-201ENST00000333213 Q6ZS46 218 aa18.32■□□□□ 0.52
TSEN54-201ENST00000333213 OR1P1Q8NH06 330 aa18.32■□□□□ 0.52
TSEN54-201ENST00000333213 BCL2P10415 239 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 LURAP1LQ8IV03 231 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 MRPL41Q8IXM3 137 aaKnown RBP18.31■□□□□ 0.52
TSEN54-201ENST00000333213 RSG1Q9BU20 258 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 GGACTQ9BVM4 153 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 WNT10AQ9GZT5 417 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 HOXA3O43365 443 aaPredicted RBP18.31■□□□□ 0.52
TSEN54-201ENST00000333213 CRYGCP07315 174 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 RND2P52198 227 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 SUB1P53999 127 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSEN54-201ENST00000333213 CD69Q07108 199 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 TREML4Q6UXN2 200 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 SGMS2Q8NHU3 365 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 Q8WTZ3 238 aa18.31■□□□□ 0.52
TSEN54-201ENST00000333213 TAF15Q92804 592 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSEN54-201ENST00000333213 FAM90A2PQ658T7 463 aa18.3■□□□□ 0.52
TSEN54-201ENST00000333213 TIMM9Q9Y5J7 89 aa18.3■□□□□ 0.52
TSEN54-201ENST00000333213 IGHV3-48P01763 117 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 TEX29Q8N6K0 151 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 RNASEH2CQ8TDP1 164 aaKnown RBP18.29■□□□□ 0.52
TSEN54-201ENST00000333213 RPRMQ9NS64 109 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 MRPL36Q9P0J6 103 aaKnown RBP18.29■□□□□ 0.52
TSEN54-201ENST00000333213 WDR83OSQ9Y284 106 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 LY6G6DO95868 133 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 IFNA1P01562 189 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 GAMTQ14353 236 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 C16orf82Q7Z2V1 217 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 TTC9CQ8N5M4 171 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 SIGLECL1Q8N7X8 197 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 OR5R1Q8NH85 324 aa18.29■□□□□ 0.52
TSEN54-201ENST00000333213 HIVEP1P15822 2718 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 SMCO3A2RU48 225 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 NPIPB5A8MRT5 1133 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 ZNF727A8MUV8 499 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 LINC00587B1AMM8 73 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 SRP14P37108 136 aaKnown RBP18.28■□□□□ 0.52
TSEN54-201ENST00000333213 OR2T6Q8NHC8 308 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 VPREB3Q9UKI3 123 aa18.28■□□□□ 0.52
TSEN54-201ENST00000333213 G3V318 75 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 OPRK1P41145 380 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 TMEM41BQ5BJD5 291 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 CENPVQ7Z7K6 275 aaPredicted RBP18.27■□□□□ 0.52
TSEN54-201ENST00000333213 OR5T1Q8NG75 326 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 MISP3Q96FF7 219 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 FANCD2OSQ96PS1 177 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 CTDSP1Q9GZU7 261 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 GNG13Q9P2W3 67 aa18.27■□□□□ 0.52
TSEN54-201ENST00000333213 LSM4Q9Y4Z0 139 aaKnown RBP18.27■□□□□ 0.52
TSEN54-201ENST00000333213 SETXQ7Z333 2677 aaKnown RBP18.27■□□□□ 0.52
TSEN54-201ENST00000333213 IGKV1OR2-108A0A075B7D4 117 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 ELOA3CA0A087WX78 387 aaPredicted RBP18.27■□□□□ 0.51
TSEN54-201ENST00000333213 M0QZK8 103 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 CXCL1P09341 107 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 FGF7P21781 194 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 ZNF674Q2M3X9 581 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 DNLZQ5SXM8 178 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 NPVFQ9HCQ7 196 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 VAX2Q9UIW0 290 aa18.27■□□□□ 0.51
TSEN54-201ENST00000333213 SEC14L6B5MCN3 397 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 IGHG2P01859 326 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 GPX4P36969 197 aaPredicted RBP18.26■□□□□ 0.51
TSEN54-201ENST00000333213 ECSCRQ19T08 205 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 C9orf152Q5JTZ5 239 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 CACNG8Q8WXS5 425 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 DUX5Q96PT3 197 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 TMUB1Q9BVT8 246 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 NPCDR1Q9BY65 106 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 DOK5Q9P104 306 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 LINC00527Q9UJ94 153 aa18.26■□□□□ 0.51
TSEN54-201ENST00000333213 IGHV3-21A0A0B4J1V1 117 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 FNDC10F2Z333 226 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 CLDN34H7C241 214 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 DEFA4P12838 97 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 CEBPGP53567 150 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 MGST2Q99735 147 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 ZNF726P1Q15940 193 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 UNQ5815/PRO19632Q6UWF5 114 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 RCC1LQ96I51 464 aaKnown RBP18.25■□□□□ 0.51
TSEN54-201ENST00000333213 SDF2L1Q9HCN8 221 aa18.25■□□□□ 0.51
TSEN54-201ENST00000333213 I3L2K1 104 aa18.24■□□□□ 0.51
TSEN54-201ENST00000333213 MT-CO2P00403 227 aa18.24■□□□□ 0.51
TSEN54-201ENST00000333213 CD81P60033 236 aa18.24■□□□□ 0.51
TSEN54-201ENST00000333213 C19orf54Q5BKX5 351 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms