RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FAM90A10PA6NDY2 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A18PA6NE21 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A16PA6NEW6 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A20PA6NIJ5 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A8PA6NJQ4 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A7PA6NKC0 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A22PA8MWA6 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A12PA8MX19 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A5PA8MXJ8 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A23PA8MXZ1 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 C9JAW5 83 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 TM4SF5O14894 197 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A15PP0C7V4 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A13PP0C7W8 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A14PP0C7W9 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 FAM90A24PP0C7X0 464 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 NEU4Q8WWR8 484 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-201ENST00000331920 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 BCL6BQ8N143 479 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-201ENST00000331920 OSR1Q8TAX0 266 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-201ENST00000331920 LINC00587B1AMM8 73 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 HSD52Q0P140 79 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 CACNG8Q8WXS5 425 aa13.72□□□□□ -0.21
PTCH1-201ENST00000331920 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-201ENST00000331920 ZNF708P17019 499 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 DTX1Q86Y01 620 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 RASL10AQ92737 203 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 RREB1Q92766 1687 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 RAMP3O60896 148 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 HAMPP81172 84 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 NDPQ00604 133 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 OVOL2Q9BRP0 275 aa13.71□□□□□ -0.21
PTCH1-201ENST00000331920 IGHG3P01860 377 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 DEFB130BP0DP73 79 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 DEFB130AP0DP74 79 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 PLCH1Q4KWH8 1693 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 D6R8Y8 96 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 CCL3L1P16619 93 aa13.71□□□□□ -0.22
PTCH1-201ENST00000331920 TMEM30BQ3MIR4 351 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 PSG8Q9UQ74 426 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 RPL36AP83881 106 aaKnown RBP13.7□□□□□ -0.22
PTCH1-201ENST00000331920 RPL36ALQ969Q0 106 aaKnown RBP13.7□□□□□ -0.22
PTCH1-201ENST00000331920 hDV102S1A0JD36 115 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 CHKB-CPT1BH3BT56 60 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 TFF1P04155 84 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 IRF3Q14653 427 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 SLC25A28Q96A46 364 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-201ENST00000331920 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 LAMB2P55268 1798 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 PATJQ8NI35 1801 aa13.7□□□□□ -0.22
PTCH1-201ENST00000331920 SAA2-SAA4A0A096LPE2 208 aa13.69□□□□□ -0.22
PTCH1-201ENST00000331920 SAA2P0DJI9 122 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-201ENST00000331920 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
PTCH1-201ENST00000331920 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
PTCH1-201ENST00000331920 F2Z2F3 143 aa13.69□□□□□ -0.22
PTCH1-201ENST00000331920 NGFRP08138 427 aa13.69□□□□□ -0.22
PTCH1-201ENST00000331920 TRBV5-5A0A0J9YX44 114 aa13.69□□□□□ -0.22
PTCH1-201ENST00000331920 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 CELA3BP08861 270 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 PSG3Q16557 428 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 PPP1R3EQ9H7J1 279 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 LYNX1G3V0Z9 82 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 LYNX1P0DP58 116 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 MMP23AO75900 390 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 SRP19P09132 144 aaKnown RBP13.68□□□□□ -0.22
PTCH1-201ENST00000331920 Q6ZT83 130 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 DEFB105AQ8NG35 78 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 SVIPQ8NHG7 77 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 CSTL1Q9H114 145 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 FCN3O75636 299 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 CECR9P0C854 216 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 EXOC3-AS1Q8N2X6 119 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 DSCR8Q96T75 97 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 SRRM4A7MD48 611 aaKnown RBP13.68□□□□□ -0.22
PTCH1-201ENST00000331920 COX6A1P12074 109 aa13.68□□□□□ -0.22
PTCH1-201ENST00000331920 PQLC2LA1A4F0 135 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 PFN2P35080 140 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 TMEM144Q7Z5S9 345 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
PTCH1-201ENST00000331920 BAALCQ8WXS3 180 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 CHCHD1Q96BP2 118 aaKnown RBP13.67□□□□□ -0.22
PTCH1-201ENST00000331920 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
PTCH1-201ENST00000331920 NDUFAF3Q9BU61 184 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 A0A087WWL8 130 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 SMRP1Q8NCR6 262 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 PLEKHB2Q96CS7 222 aa13.67□□□□□ -0.22
PTCH1-201ENST00000331920 MRPS18AQ9NVS2 196 aaKnown RBP13.67□□□□□ -0.22
PTCH1-201ENST00000331920 SOCS3O14543 225 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 ATP5IP56385 69 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-201ENST00000331920 SLC25A38Q96DW6 304 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 PTPRDP23468 1912 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms