RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MRPL32Q9BYC8 188 aaKnown RBP13.39□□□□□ -0.27
DDX41-201ENST00000330503 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 B4DEV8 164 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 COX7A2P2O60397 106 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 KRTAP10-9P60411 292 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 C22orf15Q8WYQ4 148 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 C1RLQ9NZP8 487 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 FBN2P35556 2912 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 ABCA1O95477 2261 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 F6UZH7 168 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 OR2C1O95371 312 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 MSMBP08118 114 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 CLEC12BQ2HXU8 276 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 PQLC2Q6ZP29 291 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 OR1L6Q8NGR2 347 aa13.38□□□□□ -0.27
DDX41-201ENST00000330503 NDUFB4O95168 129 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 TAS2R45P59539 299 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 BRD3OSQ6XYD6 125 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 UHRF2Q96PU4 802 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 PFDN5Q99471 154 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 TMEM167BQ9NRX6 74 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 HLA-DRB1P01911 266 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 CRYBA1P05813 215 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 IGHV4-38-2P0DP08 117 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 RPL23P62829 140 aaKnown RBP13.37□□□□□ -0.27
DDX41-201ENST00000330503 FAM24BQ8N5W8 94 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 PIFOQ8TCI5 191 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 HSPB9Q9BQS6 159 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 DERL1Q9BUN8 251 aa13.37□□□□□ -0.27
DDX41-201ENST00000330503 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 A0A096LNT2 108 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 OR7C2O60412 319 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
DDX41-201ENST00000330503 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 TSPAN9O75954 239 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 MT-ND4LP03901 98 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 OR10J4P0C629 311 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 ORM2P19652 201 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 TIGITQ495A1 244 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 RASL11BQ9BPW5 248 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
DDX41-201ENST00000330503 CELSR2Q9HCU4 2923 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
DDX41-201ENST00000330503 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 SLC25A16P16260 332 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 BPIFB3P59826 476 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 PLP1P60201 277 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 ADIRFQ15847 76 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 OR5T1Q8NG75 326 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 OR5AU1Q8NGC0 362 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 MEGF9Q9H1U4 602 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 ARL2-SNX15V9GYD0 113 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 CSMD1Q96PZ7 3565 aa13.35□□□□□ -0.27
DDX41-201ENST00000330503 A0A0U1RQK1 487 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 B4DSR2 109 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 PSG1P11464 419 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 RNF212Q495C1 297 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 LINC00305Q7Z4B0 112 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 RBM14Q96PK6 669 aaKnown RBP13.34□□□□□ -0.27
DDX41-201ENST00000330503 AVPP01185 164 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 PYYP10082 97 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 TMEM242Q9NWH2 141 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 HIF1ANQ9NWT6 349 aa13.34□□□□□ -0.27
DDX41-201ENST00000330503 CXorf65A6NEN9 183 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 HYPMO75409 117 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 FOLR2P14207 255 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 C11orf52Q96A22 123 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 S4R3C0 116 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
DDX41-201ENST00000330503 SH2D7A6NKC9 451 aaPredicted RBP13.33□□□□□ -0.28
DDX41-201ENST00000330503 LINC01548A6NM66 108 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 NDUFB8O95169 186 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 SSX3Q99909 188 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 OR51M1Q9H341 326 aa13.33□□□□□ -0.28
DDX41-201ENST00000330503 ELOBQ15370 118 aa13.32□□□□□ -0.28
DDX41-201ENST00000330503 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
DDX41-201ENST00000330503 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
DDX41-201ENST00000330503 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
DDX41-201ENST00000330503 FXYD5Q96DB9 178 aa13.32□□□□□ -0.28
DDX41-201ENST00000330503 TRBV20OR9-2A0A075B6H5 130 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 F8W735 103 aaPredicted RBP13.31□□□□□ -0.28
DDX41-201ENST00000330503 RAB5AP20339 215 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 Q8WTZ3 238 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 USP9YO00507 2555 aaPredicted RBP13.31□□□□□ -0.28
DDX41-201ENST00000330503 TRAV20A0A0B4J274 112 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
DDX41-201ENST00000330503 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
DDX41-201ENST00000330503 CTDSP1Q9GZU7 261 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms