RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CLEC3BP05452 202 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 AKR1C4P17516 323 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 PLET1Q6UQ28 207 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
CTHRC1-201ENST00000330295 DEFB131BA0A096LNP1 70 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 LOC100996750A0A140TA64 210 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 CENPXA8MT69 81 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 IGKV1-5P01602 117 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 TMEM268Q5VZI3 342 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 SPSB3Q6PJ21 355 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 ZNF502Q8TBZ5 544 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 GLYATL2Q8WU03 294 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 TRIM63Q969Q1 353 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 KRTAP4-6Q9BYQ5 205 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 C21orf62Q9NYP8 219 aa10.66□□□□□ -0.7
CTHRC1-201ENST00000330295 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 NAP1L6A6NFF2 107 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 MFSD2BA6NFX1 497 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 TSPAN4O14817 238 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 C8orf88P0DMB2 117 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 GPR183P32249 361 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 TMEM187Q14656 261 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 ZNF79Q15937 498 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 TMED4Q7Z7H5 227 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 MARC2Q969Z3 335 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 MISP3Q96FF7 219 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 CHRDL1Q9BU40 450 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 S4R3C0 116 aa10.65□□□□□ -0.7
CTHRC1-201ENST00000330295 A0A0B4J293 547 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 DBX1A6NMT0 343 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 CORTO00230 105 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 ST8SIA3O43173 380 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 MFAP4P55083 255 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 SPCS3P61009 180 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 Q56UQ5 140 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 APRG1Q8IVJ8 170 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 SELENOHQ8IZQ5 122 aaKnown RBP10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 LGI3Q8N145 548 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 ZNF114Q8NC26 417 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 FRZBQ92765 325 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 SCRT1Q9BWW7 348 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 SRRQ9GZT4 340 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 TMEM56-RWDD3S4R434 201 aa10.64□□□□□ -0.71
CTHRC1-201ENST00000330295 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 INS-IGF2F8WCM5 200 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 NUPL2O15504 423 aaKnown RBP10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 TGOLN2O43493 480 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 P0C879 139 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 IZUMO4Q1ZYL8 232 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 SERTAD4-AS1Q5TG53 156 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 UBAC2Q8NBM4 344 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 OR52E5Q8NH55 327 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 TXN2Q99757 166 aa10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
CTHRC1-201ENST00000330295 A0A0B4J2A0 478 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 OR2T8A6NH00 312 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 CEBPZOSA8MTT3 80 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 VAMP1P23763 118 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 NPBWR1P48145 328 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 ZNF124Q15973 351 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 RNF212Q495C1 297 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 PINX1Q96BK5 328 aaKnown RBP10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 C7orf50Q9BRJ6 194 aaKnown RBP10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 HEYLQ9NQ87 328 aaPredicted RBP10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 SHPKQ9UHJ6 478 aa10.62□□□□□ -0.71
CTHRC1-201ENST00000330295 IGHV3-21A0A0B4J1V1 117 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 HTR2BP41595 481 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 CCR6P51684 374 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 ELLP55199 621 aaPredicted RBP10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 CNPY1Q3B7I2 92 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 DUSP18Q8NEJ0 188 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 TMEM230Q96A57 120 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
CTHRC1-201ENST00000330295 RPS10-NUDT3A0A1W2PQS6 291 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 K7EIM0 57 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 NDUFA4O00483 81 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 GNG7O60262 68 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 MT-CO2P00403 227 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 C12orf74Q32Q52 190 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms