RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
LIN28A-202ENST00000326279 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.71
LIN28A-202ENST00000326279 CENPVQ7Z7K6 275 aaPredicted RBP10.65□□□□□ -0.71
LIN28A-202ENST00000326279 OR10D4PQ8NGN7 298 aa10.65□□□□□ -0.71
LIN28A-202ENST00000326279 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.71
LIN28A-202ENST00000326279 JKAMPQ9P055 326 aa10.65□□□□□ -0.71
LIN28A-202ENST00000326279 PYYP10082 97 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 KRTAP10-9P60411 292 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 CYP2G1PQ6ZSU1 146 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 GGTLC1Q9BX51 225 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 BUB1B-PAK6H3BSN5 160 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 MSMBP08118 114 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 ZFP36P26651 326 aaKnown RBP10.64□□□□□ -0.71
LIN28A-202ENST00000326279 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
LIN28A-202ENST00000326279 SELENOTP62341 195 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 TMEM144Q7Z5S9 345 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 Q8TCH9 128 aa10.64□□□□□ -0.71
LIN28A-202ENST00000326279 SMDT1Q9H4I9 107 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 CARHSP1Q9Y2V2 147 aaKnown RBP10.63□□□□□ -0.71
LIN28A-202ENST00000326279 ITPR3Q14573 2671 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 LHBP01229 141 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 IER3P46695 156 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 C3orf36Q3SXR2 165 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 FBXL19-AS1Q494R0 122 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 PRNTQ86SH4 94 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 HIST1H2BAQ96A08 127 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 CD5P06127 495 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 CD69Q07108 199 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 OR51M1Q9H341 326 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 SRD5A3Q9H8P0 318 aa10.63□□□□□ -0.71
LIN28A-202ENST00000326279 CHEK1O14757 476 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 NBR2O15453 112 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 LCNL1Q6ZST4 164 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 C5orf30Q96GV9 206 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 MGST2Q99735 147 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 ATRQ13535 2644 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 SLC17A3O00476 420 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 TPPP2P59282 170 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 KMT2EQ8IZD2 1858 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 NPFFO15130 113 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 HTN1P15515 57 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 TEX36Q5VZQ5 186 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 IGHV2-70P01814 119 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 PRTN3P24158 256 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 GPR183P32249 361 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 DERL1Q9BUN8 251 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 BET1LQ9NYM9 111 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
LIN28A-202ENST00000326279 FLNAP21333 2647 aaKnown RBP10.61□□□□□ -0.71
LIN28A-202ENST00000326279 IGLV2-14P01704 120 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 TRGV3P03979 118 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 DAZAP2Q15038 168 aaPredicted RBP10.61□□□□□ -0.71
LIN28A-202ENST00000326279 PRSS8Q16651 343 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 TPTE2P1Q5T6R2 138 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 GAR1Q9NY12 217 aaKnown RBP10.61□□□□□ -0.71
LIN28A-202ENST00000326279 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 CORTO00230 105 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 GOSR1O95249 250 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 AMY1AP04745 511 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 S100A7P31151 101 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 ZNF137PP52743 207 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 MFAP4P55083 255 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 RNF2Q99496 336 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 NAGKQ9UJ70 344 aa10.61□□□□□ -0.71
LIN28A-202ENST00000326279 PROP1O75360 226 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 CTRB1P17538 263 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 CTRB2Q6GPI1 263 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 SPSB3Q6PJ21 355 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 FBXL7Q9UJT9 491 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 B4DEV8 164 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
LIN28A-202ENST00000326279 NBEAP1P0C6P0 100 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 HIST1H1BP16401 226 aaKnown RBP10.6□□□□□ -0.71
LIN28A-202ENST00000326279 BATFQ16520 125 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 ZNF439Q8NDP4 499 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 TCEAL7Q9BRU2 100 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 GGACTQ9BVM4 153 aa10.6□□□□□ -0.71
LIN28A-202ENST00000326279 PMCHP20382 165 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 CENPWQ5EE01 88 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 OR2D3Q8NGH3 330 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 CPAMD8Q8IZJ3 1885 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 SNURFLB1AK76 121 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 AP4M1O00189 453 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 PHOX2AO14813 284 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 CSN3P07498 182 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 MFAP2P55001 183 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 CX3CL1P78423 397 aa10.59□□□□□ -0.71
LIN28A-202ENST00000326279 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms