RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
CD28-201ENST00000324106 FOXL2NBQ6ZUU3 175 aa7.39□□□□□ -1.23
CD28-201ENST00000324106 GAFA1Q96PS6 74 aa7.39□□□□□ -1.23
CD28-201ENST00000324106 A0A1B0GWJ7 208 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 LINC00862A6NCI5 91 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 PSPNO60542 156 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 SNRPEP62304 92 aaKnown RBP7.38□□□□□ -1.23
CD28-201ENST00000324106 CGAP01215 116 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 MPZP25189 248 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 REG4Q9BYZ8 158 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 FNDC1Q4ZHG4 1894 aaPredicted RBP7.38□□□□□ -1.23
CD28-201ENST00000324106 IGKV1D-13A0A0B4J2D9 117 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 A0A1W2PRE2 83 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 IGKV1-13P0DP09 117 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 CXCL2P19875 107 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 PLA2G5P39877 138 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 TMEM42Q69YG0 159 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 ZNF324BQ6AW86 544 aaPredicted RBP7.38□□□□□ -1.23
CD28-201ENST00000324106 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 C12orf57Q99622 126 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 OTOGLQ3ZCN5 2332 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 ZGRF1Q86YA3 2104 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 AMBPP02760 352 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 OTX1P32242 354 aaPredicted RBP7.38□□□□□ -1.23
CD28-201ENST00000324106 CD177Q8N6Q3 437 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 BEND2Q8NDZ0 799 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 KLK15Q9H2R5 256 aa7.38□□□□□ -1.23
CD28-201ENST00000324106 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
CD28-201ENST00000324106 HIVEP2P31629 2446 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 TRBV6-6A0A0A6YYG2 114 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 ETV2O00321 342 aaPredicted RBP7.37□□□□□ -1.23
CD28-201ENST00000324106 EIF3GO75821 320 aaKnown RBP eCLIP7.37□□□□□ -1.23
CD28-201ENST00000324106 MALP21145 153 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 GATA4P43694 442 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 CACNG7P62955 275 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 OR9G4Q8NGQ1 327 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 MLNRO43193 412 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 OR4C5Q8NGB2 326 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 Q8TCH9 128 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 SLX1AQ9BQ83 275 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 IGKV1-12A0A0C4DH73 117 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 IGKV1D-12P01611 117 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 CDX1P47902 265 aaPredicted RBP7.37□□□□□ -1.23
CD28-201ENST00000324106 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
CD28-201ENST00000324106 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 OR11H2Q8NH07 326 aa7.37□□□□□ -1.23
CD28-201ENST00000324106 RTBDNQ9BSG5 229 aaPredicted RBP7.37□□□□□ -1.23
CD28-201ENST00000324106 H2BFSP57053 126 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NEUROG1Q92886 237 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 VPS25Q9BRG1 176 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 MRPL18Q9H0U6 180 aaKnown RBP7.36□□□□□ -1.23
CD28-201ENST00000324106 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
CD28-201ENST00000324106 IFT22Q9H7X7 185 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
CD28-201ENST00000324106 FRMPD3Q5JV73 1810 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NCOR1P1Q9H4R4 102 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 ARFGEF3Q5TH69 2177 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 IGHV2-70DA0A0C4DH43 119 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 A0A1B0GUS0 222 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 LY6HO94772 140 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 ZNF506Q5JVG8 444 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 LAIR2Q6ISS4 152 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 SIGLEC9Q9Y336 463 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NAPSAO96009 420 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 DNAL4O96015 105 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 ZNF415Q09FC8 603 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 COTL1Q14019 142 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NRN1Q9NPD7 142 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 DAZ1Q9NQZ3 744 aaKnown RBP7.36□□□□□ -1.23
CD28-201ENST00000324106 WDR83OSQ9Y284 106 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 MGAMO43451 1857 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 PTPN13Q12923 2485 aa7.36□□□□□ -1.23
CD28-201ENST00000324106 NMBP08949 121 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 FOLR2P14207 255 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 ID3Q02535 119 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 TFF3Q07654 80 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 LBHQ53QV2 105 aaPredicted RBP7.35□□□□□ -1.23
CD28-201ENST00000324106 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 H0YJW9 148 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 INSP01308 110 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 PPBPP02775 128 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 EGR1P18146 543 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 MUC21Q5SSG8 566 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 TMEM170BQ5T4T1 132 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 ZNF562Q6V9R5 426 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 GLMPQ8WWB7 406 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 F11RQ9Y624 299 aaKnown RBP7.35□□□□□ -1.23
CD28-201ENST00000324106 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
CD28-201ENST00000324106 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms