RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PEX7O00628 323 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 LYRM7Q5U5X0 104 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 ZFP30Q9Y2G7 519 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 ZNF256Q9Y2P7 627 aaPredicted RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 GPX4P36969 197 aaPredicted RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 TDGF1P13385 188 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 PAX1P15863 534 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 LEPP41159 167 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 J3QR89 54 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 NCKAP5O14513 1909 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 GATA3P23771 443 aa11.11□□□□□ -0.63
RFFL-201ENST00000315249 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
RFFL-201ENST00000315249 PAM16Q9Y3D7 125 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 C2orf68Q2NKX9 166 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 MRPL18Q9H0U6 180 aaKnown RBP11.1□□□□□ -0.63
RFFL-201ENST00000315249 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 WISP1O95388 367 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
RFFL-201ENST00000315249 MALP21145 153 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 REC114Q7Z4M0 266 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 C5orf64Q2M2E5 130 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 C2orf88Q9BSF0 95 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
RFFL-201ENST00000315249 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
RFFL-201ENST00000315249 DENND4AQ7Z401 1863 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 IGKV1D-17A0A075B6S4 117 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 NAT1P18440 290 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 AGAP20933 346 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 GNG5P63218 68 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
RFFL-201ENST00000315249 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 RAB37Q96AX2 223 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 RCC1LQ96I51 464 aaKnown RBP11.09□□□□□ -0.63
RFFL-201ENST00000315249 REG4Q9BYZ8 158 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 SPG11Q96JI7 2443 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 TNFSF13O75888 250 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 C7orf71A4D174 169 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
RFFL-201ENST00000315249 OOSP1A8MZH6 123 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 Q5BKY6 102 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 C5orf24Q7Z6I8 188 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 TAS2R60P59551 318 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 DANCRP0C864 163 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 GATA4P43694 442 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 IGKV1D-8A0A087WSZ0 117 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 TCF21O43680 179 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
RFFL-201ENST00000315249 PSMG3Q9BT73 122 aaPredicted RBP11.08□□□□□ -0.64
RFFL-201ENST00000315249 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
RFFL-201ENST00000315249 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
RFFL-201ENST00000315249 CRPP02741 224 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 OTX1P32242 354 aaPredicted RBP11.07□□□□□ -0.64
RFFL-201ENST00000315249 TMEM170BQ5T4T1 132 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 FAM169BQ8N8A8 192 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 PCDH15Q96QU1 1955 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 PYYP10082 97 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 SRIP30626 198 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
RFFL-201ENST00000315249 STPG2Q8N412 459 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 SMIM12Q96EX1 92 aa11.07□□□□□ -0.64
RFFL-201ENST00000315249 CD8AP01732 235 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 LINC00205P59089 165 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 VPS25Q9BRG1 176 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 MT-ND6P03923 174 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
RFFL-201ENST00000315249 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
RFFL-201ENST00000315249 BEND2Q8NDZ0 799 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms