RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 A0A1W2PN81 502 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 PRR33A8MZF0 331 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 MPDU1O75352 247 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 FAM87AP0C7U9 286 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 CEACAM8P31997 349 aaPredicted RBP10.43□□□□□ -0.74
RETREG3-201ENST00000309428 WDR31Q8NA23 367 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 NEUROG1Q92886 237 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 BTF3P20290 206 aaKnown RBP10.43□□□□□ -0.74
RETREG3-201ENST00000309428 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
RETREG3-201ENST00000309428 S4R3C0 116 aa10.43□□□□□ -0.74
RETREG3-201ENST00000309428 PCSK5Q92824 1860 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 TRBV20OR9-2A0A075B6H5 130 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 C10orf55Q5SWW7 151 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 LINC00596Q86U02 117 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 HIVEP3Q5T1R4 2406 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 CT45A10P0DMU9 189 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 HES1Q14469 280 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 OR10W1Q8NGF6 305 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 TMEM70Q9BUB7 260 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 FNDC4Q9H6D8 234 aaPredicted RBP10.42□□□□□ -0.74
RETREG3-201ENST00000309428 MMP23AO75900 390 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 PSG1P11464 419 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 SPRY4Q9C004 299 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 HIF1ANQ9NWT6 349 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 CDC42EP3Q9UKI2 254 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 ADAMTS20P59510 1910 aa10.42□□□□□ -0.74
RETREG3-201ENST00000309428 USP9XQ93008 2570 aaPredicted RBP10.41□□□□□ -0.74
RETREG3-201ENST00000309428 A0A087X0K7 114 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 OR2J3O76001 311 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 STAG3L2P0CL84 134 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 STAG3L3P0CL85 134 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 C8orf88P0DMB2 117 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 HIST1H1EP10412 219 aaKnown RBP10.41□□□□□ -0.74
RETREG3-201ENST00000309428 ZNF474Q6S9Z5 364 aaPredicted RBP10.41□□□□□ -0.74
RETREG3-201ENST00000309428 ABHD17AQ96GS6 310 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 C5orf30Q96GV9 206 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 IGKV1D-17A0A075B6S4 117 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 A0A1W2PS18 150 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 ISLRO14498 428 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 PRRG2O14669 202 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 ADH4P08319 380 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 TSPOP30536 169 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 ZNF134P52741 427 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.74
RETREG3-201ENST00000309428 C19orf35Q6ZS72 473 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 GCSAMQ8N6F7 178 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 CALYQ9NYX4 217 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 DYSFO75923 2080 aa10.41□□□□□ -0.74
RETREG3-201ENST00000309428 LINC00614P0C842 121 aa10.4□□□□□ -0.74
RETREG3-201ENST00000309428 TPTE2P1Q5T6R2 138 aa10.4□□□□□ -0.74
RETREG3-201ENST00000309428 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
RETREG3-201ENST00000309428 NIT1Q86X76 327 aa10.4□□□□□ -0.74
RETREG3-201ENST00000309428 FAM222BQ8WU58 562 aa10.4□□□□□ -0.74
RETREG3-201ENST00000309428 IQCF6A8MYZ5 107 aa10.4□□□□□ -0.75
RETREG3-201ENST00000309428 CORTO00230 105 aa10.4□□□□□ -0.75
RETREG3-201ENST00000309428 ZNF883P0CG24 379 aa10.4□□□□□ -0.75
RETREG3-201ENST00000309428 MZT1Q08AG7 82 aa10.4□□□□□ -0.75
RETREG3-201ENST00000309428 C18orf15Q96N68 181 aa10.4□□□□□ -0.75
RETREG3-201ENST00000309428 MRPS18CQ9Y3D5 142 aaKnown RBP10.4□□□□□ -0.75
RETREG3-201ENST00000309428 CCL25O15444 150 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 LGALS4P56470 323 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 C20orf144Q9BQM9 153 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 DSCAMO60469 2012 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 IGHV3-35A0A0C4DH35 117 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 PLA2G2CQ5R387 149 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 FAM90A1Q86YD7 464 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 LINC01560Q8TB33 94 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 OR2T8A6NH00 312 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 IGKV1-16P04430 117 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 PRSS1P07477 247 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
RETREG3-201ENST00000309428 TRAV9-2A0A087WT02 112 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SLC25A17O43808 307 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 GCSHP23434 173 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 DUTP33316 252 aaKnown RBP10.38□□□□□ -0.75
RETREG3-201ENST00000309428 PRRX1P54821 245 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 RPL15P61313 204 aaKnown RBP10.38□□□□□ -0.75
RETREG3-201ENST00000309428 DNLZQ5SXM8 178 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 TSKUQ8WUA8 353 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SS18L1O75177 396 aaPredicted RBP10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
RETREG3-201ENST00000309428 LRRK2Q5S007 2527 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SORL1Q92673 2214 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SAA2-SAA4A0A096LPE2 208 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 H3BUT2 72 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 K7EN84 100 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SAA2P0DJI9 122 aaPredicted RBP10.38□□□□□ -0.75
RETREG3-201ENST00000309428 SLAQ13239 276 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 ZNF146Q15072 292 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 MEGF9Q9H1U4 602 aa10.38□□□□□ -0.75
RETREG3-201ENST00000309428 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
RETREG3-201ENST00000309428 KIR2DL5BA0A0G2JN68 375 aa10.37□□□□□ -0.75
RETREG3-201ENST00000309428 KIR2DL5BA0A0G2JPC4 375 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms