RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 GATAD1Q8WUU5 269 aa6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 RNF7Q9UBF6 113 aa6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 RPH3ALQ9UNE2 315 aa6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 TCF19Q9Y242 345 aa6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 LSM4Q9Y4Z0 139 aaKnown RBP6.31□□□□□ -1.4
TM4SF1-201ENST00000305366 A0A1W2PPV4 95 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 ZNF729A6NN14 1252 aaPredicted RBP6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 TMEM178BH3BS89 294 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 RRHO14718 337 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 SLC31A2O15432 143 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 FSHBP01225 129 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 NPPCP23582 126 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 EDDM3BP56851 147 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 RPS16P62249 146 aaKnown RBP6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 DEFA6Q01524 100 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 HNF4GQ14541 408 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 TMEM155Q4W5P6 130 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 CT45A1Q5HYN5 189 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 BRD3OSQ6XYD6 125 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 ZNF439Q8NDP4 499 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 CT45A3Q8NHU0 189 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 TMEM170AQ8WVE7 144 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 WFDC12Q8WWY7 111 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 BTF3L4Q96K17 158 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 IMMP2LQ96T52 175 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 MGST2Q99735 147 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 HEYLQ9NQ87 328 aaPredicted RBP6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 TMEM14BQ9NUH8 114 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 CLEC5AQ9NY25 188 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 NAGKQ9UJ70 344 aa6.3□□□□□ -1.4
TM4SF1-201ENST00000305366 TRGV10A0A0A0MS01 117 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 CXorf1O96002 111 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 HSPE1P61604 102 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TEX36Q5VZQ5 186 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 SSX9Q7RTT3 188 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 IDI2-AS1Q9NZ38 188 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PXMP4Q9Y6I8 212 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PPIAL4EA0A075B759 164 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 SAA2-SAA4A0A096LPE2 208 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TRAV3A0A0B4J244 114 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TRAV40A0A0B4J280 105 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PPIAL4CA0A0B4J2A2 164 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PPP5D1E7EU14 171 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PPIAL4DF5H284 164 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 SAA2P0DJI9 122 aaPredicted RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PPIAL4FP0DN26 164 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 NPY1RP25929 384 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 RPL29P47914 159 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 GNB1P62873 340 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PAX8Q06710 450 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 GFI1BQ5VTD9 330 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 OR4A47Q6IF82 309 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 KCNIP4Q6PIL6 250 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TCF23Q7RTU1 214 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 LINC01551Q86U37 167 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 TMEM183AQ8IXX5 376 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 VKORC1L1Q8N0U8 176 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 ZNF383Q8NA42 475 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 DAZAP1Q96EP5 407 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 ACY3Q96HD9 319 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 GAFA1Q96PS6 74 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PCGF1Q9BSM1 259 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 PRNDQ9UKY0 176 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 ZNF257Q9Y2Q1 563 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 ARL2-SNX15V9GYD0 113 aa6.29□□□□□ -1.4
TM4SF1-201ENST00000305366 MEGF8Q7Z7M0 2845 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 IRF2P14316 349 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 HIST1H1BP16401 226 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 ATP5G3P48201 142 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 SSX2Q16385 188 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 DEFB112Q30KQ8 113 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 RUSC1-AS1Q66K80 236 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 ABHD12Q8N2K0 398 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 KIR3DL3Q8N743 410 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 OR8B3Q8NGG8 313 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 OR2T10Q8NGZ9 312 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 RNASEH2CQ8TDP1 164 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 OR8B2Q96RD0 313 aa6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms