RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 KIAA0141Q14154 515 aaPredicted RBP12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 ZNF266Q14584 549 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 C19orf54Q5BKX5 351 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 OR1P1Q8NH06 330 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 TMEM147Q9BVK8 224 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 GGACTQ9BVM4 153 aa12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
SRGAP2C-201ENST00000304465 MLANAQ16655 118 aa12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 LILRB2Q8N423 598 aa12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 TTC9CQ8N5M4 171 aa12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 SH3BGRL3Q9H299 93 aa12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 FNDC4Q9H6D8 234 aaPredicted RBP12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
SRGAP2C-201ENST00000304465 NPIPB5A8MRT5 1133 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 IFNA7P01567 189 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 TRGV3P03979 118 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 SPP1P10451 314 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 CD69Q07108 199 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 RNASEH2CQ8TDP1 164 aaKnown RBP12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 TMEM68Q96MH6 324 aa12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 WDR61Q9GZS3 305 aaKnown RBP12.37□□□□□ -0.43
SRGAP2C-201ENST00000304465 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 FNDC10F2Z333 226 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 LINC01619G3V211 115 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 INSL3P51460 131 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 SUB1P53999 127 aaKnown RBP eCLIP12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 KLK9Q2XQG4 91 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 FAM74A1Q5RGS3 127 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 MRPL36Q9P0J6 103 aaKnown RBP12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 WDR83OSQ9Y284 106 aa12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
SRGAP2C-201ENST00000304465 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 H3BUA1 57 aa12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 OVOL1O14753 267 aa12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 SEC11BP0C7V7 166 aa12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
SRGAP2C-201ENST00000304465 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 IFNA5P01569 189 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 GAMTQ14353 236 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 CACNG8Q8WXS5 425 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 SLC25A32Q9H2D1 315 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 IGLV11-55A0A075B6I3 123 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 IGKV1OR2-108A0A075B7D4 117 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 I3L2K1 104 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 PRH1P02810 166 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 HSPB1P04792 205 aaKnown RBP12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 SLURP1P55000 103 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 SLC16A13Q7RTY0 426 aa12.34□□□□□ -0.43
SRGAP2C-201ENST00000304465 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 A0A087WW49 117 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 K7EIM0 57 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 SAP30O75446 220 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 NMBP08949 121 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 FGF7P21781 194 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 BTNL8Q6UX41 500 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 DLX4Q92988 240 aaPredicted RBP12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 NPVFQ9HCQ7 196 aa12.33□□□□□ -0.44
SRGAP2C-201ENST00000304465 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 SULT1A2P50226 295 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 SLC25A24Q6NUK1 477 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 TMEM144Q7Z5S9 345 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 SCGB1C1Q8TD33 95 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 MISP3Q96FF7 219 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 PRR25Q96S07 402 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 MGST2Q99735 147 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 NPCDR1Q9BY65 106 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 TIMM9Q9Y5J7 89 aa12.32□□□□□ -0.44
SRGAP2C-201ENST00000304465 CORTO00230 105 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 MT-CO2P00403 227 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 OPRK1P41145 380 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 EIF5AL1Q6IS14 154 aaKnown RBP12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 OR2G3Q8NGZ4 309 aa12.31□□□□□ -0.44
SRGAP2C-201ENST00000304465 IGKV1D-37A0A075B6S9 117 aa12.3□□□□□ -0.44
SRGAP2C-201ENST00000304465 TRBV9A0A0B4J1U6 114 aa12.3□□□□□ -0.44
SRGAP2C-201ENST00000304465 SMCO3A2RU48 225 aa12.3□□□□□ -0.44
SRGAP2C-201ENST00000304465 ZP3P21754 424 aa12.3□□□□□ -0.44
SRGAP2C-201ENST00000304465 THAP8Q8NA92 274 aa12.3□□□□□ -0.44
SRGAP2C-201ENST00000304465 TMEM116Q8NCL8 245 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms