RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IGKV1-8A0A0C4DH67 115 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 A0A1W2PRE2 83 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 PPP1R32Q7Z5V6 425 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 FAM90A1Q86YD7 464 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 SELENOKQ9Y6D0 94 aa8.66□□□□□ -1.02
CLIP1-201ENST00000302528 SP9P0CG40 484 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 CD200R1LQ6Q8B3 271 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-201ENST00000302528 CITED1Q99966 193 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 LSM4Q9Y4Z0 139 aaKnown RBP8.65□□□□□ -1.02
CLIP1-201ENST00000302528 C5orf67F2Z3F1 127 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 SS18Q15532 418 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 C1QL2Q7Z5L3 287 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 TMEM133Q9H2Q1 129 aa8.65□□□□□ -1.02
CLIP1-201ENST00000302528 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 C15orf61A6NNL5 157 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 CD5LO43866 347 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 C1QCP02747 245 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 SRSF7Q16629 238 aaKnown RBP eCLIP8.65□□□□□ -1.03
CLIP1-201ENST00000302528 RSPO4Q2I0M5 234 aaPredicted RBP8.65□□□□□ -1.03
CLIP1-201ENST00000302528 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 GNB1LQ9BYB4 327 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 CCDC88CQ9P219 2028 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 C9orf153Q5TBE3 101 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.03
CLIP1-201ENST00000302528 RASL11AQ6T310 242 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 TSKUQ8WUA8 353 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 SIGLEC12Q96PQ1 595 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 TM2D1Q9BX74 207 aa8.65□□□□□ -1.03
CLIP1-201ENST00000302528 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 PRIMA1Q86XR5 153 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 TRAV40A0A0B4J280 105 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-201ENST00000302528 C1orf53Q5VUE5 145 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 PLSCR4Q9NRQ2 329 aa8.64□□□□□ -1.03
CLIP1-201ENST00000302528 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 A0A0G2JK05 382 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 TBX6O95947 436 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-201ENST00000302528 TCTEX1D4Q5JR98 221 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 IGKV2-40A0A087WW87 121 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-201ENST00000302528 A6NNC1 897 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 IGKV2D-40P01614 121 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-201ENST00000302528 CELA3AP09093 270 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 PSG7Q13046 419 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 C1QL4Q86Z23 238 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 RFPL3SP0C7P2 107 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 LHBP01229 141 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-201ENST00000302528 D6R8Y8 96 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 SOCS3O14543 225 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 THBDP07204 575 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 LINC01590Q5TEZ4 76 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
CLIP1-201ENST00000302528 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-201ENST00000302528 VCYO14598 125 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 TIMM23O14925 209 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 YPEL1O60688 119 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 FXYD7P58549 80 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 RNASE6Q93091 150 aaKnown RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 SLC25A28Q96A46 364 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 YPEL2Q96QA6 119 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 RTBDNQ9BSG5 229 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 SCRT1Q9BWW7 348 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 ACTL10Q5JWF8 245 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 MIA3Q5JRA6 1907 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 IFITM2Q01629 132 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 GUSBP1Q15486 140 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 IQCF6A8MYZ5 107 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 CGB3P0DN86 165 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 CGB7P0DN87 165 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 CRIM1Q9NZV1 1036 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 WFDC6Q9BQY6 131 aa8.62□□□□□ -1.03
CLIP1-201ENST00000302528 RSPO3Q9BXY4 272 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-201ENST00000302528 TCRAP04437 139 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 IGHV1-2P23083 117 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 PLPPR1Q8TBJ4 325 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 FBLIM1Q8WUP2 373 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 IFI6P09912 130 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 FAM90A2PQ658T7 463 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 SLC25A48Q6ZT89 311 aaKnown RBP8.61□□□□□ -1.03
CLIP1-201ENST00000302528 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 C9JAW5 83 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 EFNB3Q15768 340 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 CD5P06127 495 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
CLIP1-201ENST00000302528 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
CLIP1-201ENST00000302528 C1QTNF5Q9BXJ0 243 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms