RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 RNASE2P10153 161 aaKnown RBP4.52□□□□□ -1.69
ITGB1-201ENST00000302278 DEFA1P59665 94 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 DEFA3P59666 94 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 GPR107Q5VW38 600 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 SLC24A4Q8NFF2 622 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 OR1S2Q8NGQ3 325 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 OR6F1Q8NGZ6 308 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 MISP3Q96FF7 219 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 SCN3BQ9NY72 215 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 TPRKBQ9Y3C4 175 aa4.52□□□□□ -1.69
ITGB1-201ENST00000302278 A0A075B6Q4 140 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 G6PCP35575 357 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 UCP3P55916 312 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 TTC32Q5I0X7 151 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 C1orf158Q8N1D5 194 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 NRN1Q9NPD7 142 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 LINC00588Q9Y4M8 146 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 H3BNG1 76 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 RGS10O43665 173 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 NUP62P37198 522 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-201ENST00000302278 PSMB3P49720 205 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 SNRPD3P62318 126 aaKnown RBP4.51□□□□□ -1.69
ITGB1-201ENST00000302278 DHRS2Q13268 280 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 NEDD8Q15843 81 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 STXBP6Q8NFX7 210 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 AUNIPQ9H7T9 357 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 RABAC1Q9UI14 185 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 J3QRK9 145 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 GPR31O00270 319 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 BUB3O43684 328 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 SCGB2A1O75556 95 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 TOMM40O96008 361 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 RLN1P04808 185 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 RND3P61587 244 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 ERHP84090 104 aaKnown RBP4.51□□□□□ -1.69
ITGB1-201ENST00000302278 AKAP14Q86UN6 197 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 LINC00612Q8N6U2 182 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 OR51H1Q8NH63 302 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 FNDC4Q9H6D8 234 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-201ENST00000302278 PGPEP1Q9NXJ5 209 aa4.51□□□□□ -1.69
ITGB1-201ENST00000302278 MRPL36Q9P0J6 103 aaKnown RBP4.51□□□□□ -1.69
ITGB1-201ENST00000302278 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 IGKV3-7A0A075B6H7 116 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 ZNF701M0R085 212 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-201ENST00000302278 IGLC1P0CG04 106 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 PSMG4Q5JS54 123 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 SAMD13Q5VXD3 122 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 NARS2Q96I59 477 aaKnown RBP4.5□□□□□ -1.69
ITGB1-201ENST00000302278 TMED3Q9Y3Q3 217 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 IGHV3OR16-13A0A075B7E8 117 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 IGHV3-74A0A0B4J1X5 117 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 FAM25AB3EWG3 89 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 FAM25CB3EWG5 89 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 FAM25GB3EWG6 89 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 GSTZ1O43708 216 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-201ENST00000302278 PTHLHP12272 177 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 B2MP61769 119 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 AMTNQ6UX39 209 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 OR52E5Q8NH55 327 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 FAT1Q14517 4588 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-201ENST00000302278 KRASP01116 189 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 Q5VSD8 79 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 LPCAT3Q6P1A2 487 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 SCPEP1Q9HB40 452 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 XCL2Q9UBD3 114 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 RABL2BQ9UNT1 228 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 NSG2Q9Y328 171 aa4.5□□□□□ -1.69
ITGB1-201ENST00000302278 S100A5P33763 92 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 C1orf194Q5T5A4 169 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 OR8G2PQ6IF36 304 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 SFXN4Q6P4A7 337 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 GOLT1BQ9Y3E0 138 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 YTHDF2Q9Y5A9 579 aaKnown RBP4.49□□□□□ -1.69
ITGB1-201ENST00000302278 IGHV3-66A0A0C4DH42 116 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 LOC102723971A0A1B0GUV8 181 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 CENPXA8MT69 81 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 SLC25A4P12235 298 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 SUB1P53999 127 aaKnown RBP eCLIP4.49□□□□□ -1.69
ITGB1-201ENST00000302278 TAS2R46P59540 309 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 CMTM1Q8IZ96 169 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
ITGB1-201ENST00000302278 RAB2BQ8WUD1 216 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 ARPC5LQ9BPX5 153 aa4.49□□□□□ -1.69
ITGB1-201ENST00000302278 PTGES3LE9PB15 166 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 PPP5CP53041 499 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 HERV-K104P61576 105 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 C2orf83Q53S99 150 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 OR4A16Q8NH70 328 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 ZNF486Q96H40 463 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-201ENST00000302278 DIABLOQ9NR28 239 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 TXNL4BQ9NX01 149 aaKnown RBP4.48□□□□□ -1.69
ITGB1-201ENST00000302278 MRPS16Q9Y3D3 137 aaKnown RBP4.48□□□□□ -1.69
ITGB1-201ENST00000302278 A0A0B4J293 547 aa4.48□□□□□ -1.69
ITGB1-201ENST00000302278 B3GALNT1O75752 331 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms