RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ACTL10Q5JWF8 245 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 FAM19A2Q8N3H0 131 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 MESP2Q0VG99 397 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 STPG1Q5TH74 334 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 NEGR1Q7Z3B1 354 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 TMEM52Q8NDY8 209 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 CCL4P13236 92 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 TFF3Q07654 80 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 UBE2V1Q13404 147 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 KLF17Q5JT82 389 aaPredicted RBP9.49□□□□□ -0.89
GCN1-201ENST00000300648 ZNF71Q9NQZ8 489 aaPredicted RBP9.49□□□□□ -0.89
GCN1-201ENST00000300648 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 IGKV1D-42A0A075B6H8 117 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 IGKV3D-11A0A0A0MRZ8 115 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 IQCF6A8MYZ5 107 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 IGKV3-11P04433 115 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 REG1AP05451 166 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 SPRED2Q7Z698 418 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 IGHV4-39P01824 125 aa9.49□□□□□ -0.89
GCN1-201ENST00000300648 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
GCN1-201ENST00000300648 C12orf77C9JDV5 145 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 DLEU1O43261 78 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 ACACBO00763 2458 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 IGHV3OR16-12A0A075B7B8 117 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 CSRP3P50461 194 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 Q5BKY6 102 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 NBR2O15453 112 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 UMODP07911 640 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 EDA2RQ9HAV5 297 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 A0A0G2JK05 382 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 COX6A1P12074 109 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
GCN1-201ENST00000300648 FOXA2Q9Y261 457 aaPredicted RBP9.48□□□□□ -0.89
GCN1-201ENST00000300648 PF4P02776 101 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 WNK1Q9H4A3 2382 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 PRCDQ00LT1 54 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 EGR4Q05215 589 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 SAP25Q8TEE9 199 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 ANAPC1Q9H1A4 1944 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 IGHV3-72A0A0B4J1Y9 119 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 ZNF497Q6ZNH5 498 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 CCL19Q99731 98 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
GCN1-201ENST00000300648 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
GCN1-201ENST00000300648 HELZP42694 1942 aaKnown RBP9.47□□□□□ -0.89
GCN1-201ENST00000300648 FREM1Q5H8C1 2179 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 A0A0G2JMM0 328 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 A0A1W2PPB8 328 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 KIR3DP1A8MWS1 328 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 SP9P0CG40 484 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 RNASE4P34096 147 aaKnown RBP9.46□□□□□ -0.89
GCN1-201ENST00000300648 CENPVQ7Z7K6 275 aaPredicted RBP9.46□□□□□ -0.89
GCN1-201ENST00000300648 PLXNA3P51805 1871 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 CDK2AP2O75956 126 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 CD28P10747 220 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 FAM90A2PQ658T7 463 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 FRMPD3Q5JV73 1810 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 LEPROTO15243 131 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.89
GCN1-201ENST00000300648 EFEMP2O95967 443 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 TOMM40O96008 361 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 ATP5G3P48201 142 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 H3BMM0 161 aa9.46□□□□□ -0.9
GCN1-201ENST00000300648 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.9
GCN1-201ENST00000300648 TRGV2A0A075B6R0 118 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 RNF126Q9BV68 326 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 PLXNB1O43157 2135 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 GFRA3O60609 400 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 EFNB3Q15768 340 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 USF3Q68DE3 2245 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 AMBPP02760 352 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 ATP5J2P56134 94 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 ID3Q02535 119 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 MIR17HGQ75NE6 70 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 FAM89BQ8N5H3 189 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 RPP25Q9BUL9 199 aaKnown RBP9.45□□□□□ -0.9
GCN1-201ENST00000300648 KLF12Q9Y4X4 402 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 ST6GALNAC6Q969X2 333 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 RNF5Q99942 180 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 FAM208BQ5VWN6 2430 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 TGIF1Q15583 401 aa9.45□□□□□ -0.9
GCN1-201ENST00000300648 VWC2LB2RUY7 222 aa9.44□□□□□ -0.9
GCN1-201ENST00000300648 CD5LO43866 347 aa9.44□□□□□ -0.9
GCN1-201ENST00000300648 CD7P09564 240 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms