RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 WDR83OSQ9Y284 106 aa16.35■□□□□ 0.21
SMCO4-201ENST00000298966 EPPK1P58107 5090 aaKnown RBP16.35■□□□□ 0.21
SMCO4-201ENST00000298966 UBE2L5PA0A1B0GUS4 154 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 C17orf112F2Z3M2 114 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 HIST1H1BP16401 226 aaKnown RBP16.34■□□□□ 0.21
SMCO4-201ENST00000298966 AKIRIN2Q53H80 203 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 SLC7A5P1Q8MH63 180 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 SLC35E1Q96K37 410 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 THYN1Q9P016 225 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 TENM2Q9NT68 2774 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 SACSQ9NZJ4 4579 aa16.34■□□□□ 0.21
SMCO4-201ENST00000298966 ATP6V1G1O75348 118 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 IGHG2P01859 326 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 AMY1AP04745 511 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 SERF2P84101 59 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 NDPQ00604 133 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 RAB31Q13636 194 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 KLK9Q2XQG4 91 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 OR2G3Q8NGZ4 309 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 PCNPQ8WW12 178 aaKnown RBP16.33■□□□□ 0.2
SMCO4-201ENST00000298966 PLA2G2EQ9NZK7 142 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 KLK9Q9UKQ9 250 aa16.33■□□□□ 0.2
SMCO4-201ENST00000298966 IGF1P05019 195 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 DEFA4P12838 97 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 BLOC1S1P78537 153 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 SLC16A13Q7RTY0 426 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 TMEM144Q7Z5S9 345 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 ZNF709Q8N972 641 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 HSPB9Q9BQS6 159 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 PARP11Q9NR21 331 aa16.32■□□□□ 0.2
SMCO4-201ENST00000298966 ZNF705EA8MWA4 302 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-201ENST00000298966 EGR2P11161 476 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-201ENST00000298966 FGF7P21781 194 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 OPRK1P41145 380 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 RUNX1Q01196 453 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 TEPPQ6URK8 271 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 C10orf99Q6UWK7 81 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 DPPA3Q6W0C5 159 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 SLC35E3Q7Z769 313 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 FBXO7Q9Y3I1 522 aa16.31■□□□□ 0.2
SMCO4-201ENST00000298966 ATP6V0E1O15342 81 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 BRI3O95415 125 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 REG1AP05451 166 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 AKR1C1Q04828 323 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 ASPHD1Q5U4P2 390 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 UNQ5815/PRO19632Q6UWF5 114 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 BTNL8Q6UX41 500 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 TMEM182Q6ZP80 229 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-201ENST00000298966 LFNGQ8NES3 379 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 FAM103A1Q9BTL3 118 aaKnown RBP16.3■□□□□ 0.2
SMCO4-201ENST00000298966 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
SMCO4-201ENST00000298966 LSM4Q9Y4Z0 139 aaKnown RBP16.3■□□□□ 0.2
SMCO4-201ENST00000298966 SMCO3A2RU48 225 aa16.29■□□□□ 0.2
SMCO4-201ENST00000298966 AP4M1O00189 453 aa16.29■□□□□ 0.2
SMCO4-201ENST00000298966 MBP02144 154 aa16.29■□□□□ 0.2
SMCO4-201ENST00000298966 MISP3Q96FF7 219 aa16.29■□□□□ 0.2
SMCO4-201ENST00000298966 NPCDR1Q9BY65 106 aa16.29■□□□□ 0.2
SMCO4-201ENST00000298966 IGLV11-55A0A075B6I3 123 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 NUDT19A8MXV4 375 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 H3BUA1 57 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 GAMTQ14353 236 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 AKR1C8PQ5T2L2 129 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 COMMD7Q86VX2 200 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 RSG1Q9BU20 258 aa16.28■□□□□ 0.2
SMCO4-201ENST00000298966 TRAV41A0A0B4J266 112 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 PSMB11A5LHX3 300 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 CAMLGP49069 296 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 MFAP2P55001 183 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 C9orf152Q5JTZ5 239 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 CASC10Q5T4H9 136 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 Q6ZRG5 221 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 TMEM116Q8NCL8 245 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 MUC7Q8TAX7 377 aa16.27■□□□□ 0.2
SMCO4-201ENST00000298966 SCGB2A1O75556 95 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 PRH1P02810 166 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 APELAP0DMC3 54 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 MYCNOSP40205 109 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 ECSCRQ19T08 205 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 C19orf54Q5BKX5 351 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 PXDC1Q5TGL8 231 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 THAP8Q8NA92 274 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 ASCL2Q99929 193 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 FNDC4Q9H6D8 234 aaPredicted RBP16.26■□□□□ 0.19
SMCO4-201ENST00000298966 DNAH7Q8WXX0 4024 aa16.26■□□□□ 0.19
SMCO4-201ENST00000298966 SH2D7A6NKC9 451 aaPredicted RBP16.25■□□□□ 0.19
SMCO4-201ENST00000298966 I3L2K1 104 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 MT-CO2P00403 227 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 OR4X1Q8NH49 305 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 LYPD6BQ8NI32 183 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 VN1R17PQ8TDU5 208 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 ATP6V0BQ99437 205 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 RFNGQ9Y644 331 aa16.25■□□□□ 0.19
SMCO4-201ENST00000298966 RPL29P47914 159 aaKnown RBP16.24■□□□□ 0.19
SMCO4-201ENST00000298966 SELENOTP62341 195 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 TMEM41BQ5BJD5 291 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 IL34Q6ZMJ4 242 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 C8orf86Q6ZUL3 223 aa16.24■□□□□ 0.19
SMCO4-201ENST00000298966 EIF4E3Q8N5X7 224 aaKnown RBP16.24■□□□□ 0.19
SMCO4-201ENST00000298966 FAM213BQ8TBF2 198 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms