RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 C7orf71A4D174 169 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 H0YJW9 148 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 MOSP00540 346 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 IGLV2-8P01709 118 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 LINC00305Q7Z4B0 112 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 OR1L4Q8NGR5 311 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
TRUB1-201ENST00000298746 PILRBQ9UKJ0 227 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 DSPP15924 2871 aaKnown RBP9.32□□□□□ -0.92
TRUB1-201ENST00000298746 CACNA1BQ00975 2339 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 C2orf70A6NJV1 201 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 GPR183P32249 361 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 TMEM105Q8N8V8 129 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 TMEM116Q8NCL8 245 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
TRUB1-201ENST00000298746 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 SPTBN2O15020 2390 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 IGKV1D-17A0A075B6S4 117 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 TAX1BP3O14907 124 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 CECR9P0C854 216 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 ADTRPQ96IZ2 230 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 ZPBPQ9BS86 351 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 C19orf24Q9BVV8 132 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 HSPB8Q9UJY1 196 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
TRUB1-201ENST00000298746 LIPFP07098 398 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
TRUB1-201ENST00000298746 PMS2CLQ68D20 193 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
TRUB1-201ENST00000298746 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 J3QW42 95 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 CD69Q07108 199 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 GTF2H5Q6ZYL4 71 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 SPATA12Q7Z6I5 190 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 TEX50A0A1B0GTY4 177 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 SAA1P0DJI8 122 aaPredicted RBP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 C10orf55Q5SWW7 151 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 ATP1A1-AS1Q5TC04 95 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 HCP5Q6MZN7 132 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 CCL13Q99616 98 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 MRPL32Q9BYC8 188 aaKnown RBP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 hADV38S2A0JD32 116 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 H3BUT2 72 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 M0R1B8 84 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 NTN3O00634 580 aaPredicted RBP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 SUB1P53999 127 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRUB1-201ENST00000298746 PRNTQ86SH4 94 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 IGF2BP2-AS1Q96M15 143 aa9.3□□□□□ -0.92
TRUB1-201ENST00000298746 UPK2O00526 184 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 SAP30O75446 220 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 PEAR1Q5VY43 1037 aaPredicted RBP9.29□□□□□ -0.92
TRUB1-201ENST00000298746 VWA1Q6PCB0 445 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
TRUB1-201ENST00000298746 ITLN1Q8WWA0 313 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 SPRR3Q9UBC9 169 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 DLL1O00548 723 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
TRUB1-201ENST00000298746 TM4SF20Q53R12 229 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 RASL11AQ6T310 242 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 H1FXQ92522 213 aaKnown RBP9.29□□□□□ -0.92
TRUB1-201ENST00000298746 GPR82Q96P67 336 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 TMUB1Q9BVT8 246 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 ZNF430Q9H8G1 570 aaPredicted RBP9.29□□□□□ -0.92
TRUB1-201ENST00000298746 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
TRUB1-201ENST00000298746 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 SPTBN1Q01082 2364 aaKnown RBP9.28□□□□□ -0.92
TRUB1-201ENST00000298746 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 LAMTOR5O43504 91 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 APOHP02749 345 aaPredicted RBP9.28□□□□□ -0.92
TRUB1-201ENST00000298746 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 CSN1S1P47710 185 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 LOXL3P58215 753 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 HIST1H1AQ02539 215 aaPredicted RBP9.28□□□□□ -0.92
TRUB1-201ENST00000298746 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
TRUB1-201ENST00000298746 ZNF329Q86UD4 541 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 DEFB125Q8N687 156 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 SMIM12Q96EX1 92 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
TRUB1-201ENST00000298746 GCSAMQ8N6F7 178 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 TMEM178AQ8NBL3 297 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 ASCL2Q99929 193 aa9.28□□□□□ -0.92
TRUB1-201ENST00000298746 KBTBD11-OT1A0A1B0GTJ5 212 aa9.27□□□□□ -0.92
TRUB1-201ENST00000298746 RNASE2P10153 161 aaKnown RBP9.27□□□□□ -0.92
TRUB1-201ENST00000298746 NMUP48645 174 aa9.27□□□□□ -0.92
TRUB1-201ENST00000298746 WFDC8Q8IUA0 241 aa9.27□□□□□ -0.92
TRUB1-201ENST00000298746 F11RQ9Y624 299 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms