RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 IGKV1D-33P01593 117 aa9.15□□□□□ -0.95
PBRM1-201ENST00000296302 IGKV1-33P01594 117 aa9.15□□□□□ -0.95
PBRM1-201ENST00000296302 MGST2Q99735 147 aa9.15□□□□□ -0.95
PBRM1-201ENST00000296302 TDRD6O60522 2096 aaKnown RBP9.15□□□□□ -0.95
PBRM1-201ENST00000296302 TRGV3P03979 118 aa9.15□□□□□ -0.95
PBRM1-201ENST00000296302 S4R3C0 116 aa9.15□□□□□ -0.95
PBRM1-201ENST00000296302 PLXNA1Q9UIW2 1896 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 CD5LO43866 347 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 EFEMP2O95967 443 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 Q0VG73 95 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 SPATA31B1PQ5VZV4 182 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 PNRC2Q9NPJ4 139 aaKnown RBP9.14□□□□□ -0.95
PBRM1-201ENST00000296302 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
PBRM1-201ENST00000296302 BRCA1P38398 1863 aaKnown RBP9.14□□□□□ -0.95
PBRM1-201ENST00000296302 EFNA2O43921 213 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 FOXF2Q12947 444 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 TMEM42Q69YG0 159 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 LCN12Q6JVE5 192 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 PPP1R27Q86WC6 154 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 SEPSECSQ9HD40 501 aaKnown RBP9.14□□□□□ -0.95
PBRM1-201ENST00000296302 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 UCNP55089 124 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV2-5P01817 119 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 RPRMLQ8N4K4 120 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
PBRM1-201ENST00000296302 GUSBP1Q15486 140 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-201ENST00000296302 POLR3KQ9Y2Y1 108 aaPredicted RBP9.13□□□□□ -0.95
PBRM1-201ENST00000296302 LCTP09848 1927 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV3-49A0A0A0MS15 119 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
PBRM1-201ENST00000296302 ESDP10768 282 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 NBR2O15453 112 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 FREM3P0C091 2139 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 ATP1A1-AS1Q5TC04 95 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 YAE1D1Q9NRH1 226 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 PSMB11A5LHX3 300 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 C17orf100A8MU93 164 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 FOXH1O75593 365 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 FAM71F2Q6NXP2 309 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
PBRM1-201ENST00000296302 SNRNP200O75643 2136 aaKnown RBP9.12□□□□□ -0.95
PBRM1-201ENST00000296302 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 CCL3L1P16619 93 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 SNHG12Q9BXW3 62 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 CEP290O15078 2479 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 IFI27P40305 119 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-201ENST00000296302 TMEM95Q3KNT9 176 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 CACNA1DQ01668 2161 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
PBRM1-201ENST00000296302 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 STPG1Q5TH74 334 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 A0A087X0K7 114 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 GAGE2EQ4V326 116 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 KIR3DL3Q8N743 410 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 GAGE2DQ9UEU5 116 aa9.12□□□□□ -0.95
PBRM1-201ENST00000296302 SPTA1P02549 2419 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 GREB1Q4ZG55 1949 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 TRAV21A0A0B4J279 112 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 TCRAP04437 139 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 PLNP26678 52 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 ZFAND6Q6FIF0 208 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 TMEM133Q9H2Q1 129 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 PAX2Q02962 417 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 JMJD8Q96S16 334 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 PSG1P11464 419 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 CD33P20138 364 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 ASCL4Q6XD76 172 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 RNF144BQ7Z419 303 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 D6R8Y8 96 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 CNTFRP26992 372 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 RNASE4P34096 147 aaKnown RBP9.11□□□□□ -0.95
PBRM1-201ENST00000296302 FHL1Q13642 323 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 LAGE3Q14657 143 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 CLEC19AQ6UXS0 136 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 PIMREGQ9BSJ6 248 aa9.11□□□□□ -0.95
PBRM1-201ENST00000296302 RPUSD1Q9UJJ7 312 aaKnown RBP9.11□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV4-39P01824 125 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 LY6EQ16553 131 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 TNFRSF14Q92956 283 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 ANAPC10Q9UM13 185 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 FNDC10F2Z333 226 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 CLPSP04118 112 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms