RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 Q9UFV3 132 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 IGHV3-11P01762 117 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 NPSP0C0P6 89 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 YLPM1P49750 1951 aaKnown RBP11.14□□□□□ -0.63
HPS3-201ENST00000296051 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
HPS3-201ENST00000296051 MFAP4P55083 255 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 IGHV3OR16-8A0A075B7F1 116 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 TNFSF13O75888 250 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 PYYP10082 97 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 GNG5P63218 68 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 HSPB7Q9UBY9 170 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 HIGD1AQ9Y241 93 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 HTTP42858 3142 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 IGHV1-18A0A0C4DH31 117 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 HIGD1CA8MV81 97 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 RSPO1Q2MKA7 263 aaPredicted RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 POLR3KQ9Y2Y1 108 aaPredicted RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 PLP1P60201 277 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 EFNB3Q15768 340 aa11.13□□□□□ -0.63
HPS3-201ENST00000296051 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
HPS3-201ENST00000296051 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
HPS3-201ENST00000296051 CA7P43166 264 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 NPFFR1Q9GZQ6 430 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
HPS3-201ENST00000296051 NPIPB11E5RHQ5 1161 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 TNCP24821 2201 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
HPS3-201ENST00000296051 MYOD1P15172 320 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 ZNF430Q9H8G1 570 aaPredicted RBP11.12□□□□□ -0.63
HPS3-201ENST00000296051 C5orf42Q9H799 3197 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 IGLV3-32A0A0A0MS00 114 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
HPS3-201ENST00000296051 SELLP14151 372 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 PLXNA2O75051 1894 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 IGHV3-23P01764 117 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 MAPK1IP1LQ8NDC0 245 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 VCANP13611 3396 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
HPS3-201ENST00000296051 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 Q71RC1 249 aaPredicted RBP11.11□□□□□ -0.63
HPS3-201ENST00000296051 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 EFNA4P52798 201 aa11.11□□□□□ -0.63
HPS3-201ENST00000296051 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 MGPP08493 103 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 PRSS8Q16651 343 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 GGNQ86UU5 652 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 AGMATQ9BSE5 352 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 GGTLC1Q9BX51 225 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 IL18BPO95998 194 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 KIAA1671Q9BY89 1806 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 CKS2P33552 79 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 NIT1Q86X76 327 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
HPS3-201ENST00000296051 NPPCP23582 126 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 TMEM42Q69YG0 159 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 OR10J6PQ8NGY7 276 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 LINC00473A8K010 186 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 NBEAP1P0C6P0 100 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 HBBP68871 147 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 TWIST1Q15672 202 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 USP34Q70CQ2 3546 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
HPS3-201ENST00000296051 KIR3DL3Q8N743 410 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms