RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ABCA2Q9BZC7 2435 aa7.27□□□□□ -1.24
PDPN-201ENST00000294489 IGKV1D-37A0A075B6S9 117 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 CD24P25063 80 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 RPS10P46783 165 aaKnown RBP7.27□□□□□ -1.25
PDPN-201ENST00000294489 ZNF90Q03938 601 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 OR1L6Q8NGR2 347 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 ANAPC16Q96DE5 110 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 TRGV9Q99603 122 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
PDPN-201ENST00000294489 ELOA3CA0A087WX78 387 aaPredicted RBP7.27□□□□□ -1.25
PDPN-201ENST00000294489 SLC25A16P16260 332 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 FXYD3Q14802 87 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 C5orf64Q2M2E5 130 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 LPAR2Q9HBW0 351 aa7.27□□□□□ -1.25
PDPN-201ENST00000294489 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
PDPN-201ENST00000294489 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 PSMB11A5LHX3 300 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 H7BYZ3 331 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 S100PP25815 95 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 C1QL4Q86Z23 238 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 OR5B12Q96R08 314 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 WNT10AQ9GZT5 417 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 BEX4Q9NWD9 120 aaPredicted RBP7.26□□□□□ -1.25
PDPN-201ENST00000294489 PPP1R14DQ9NXH3 145 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 NCBP2LA6PVI3 153 aaKnown RBP7.26□□□□□ -1.25
PDPN-201ENST00000294489 AKR1D1P51857 326 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 C19orf35Q6ZS72 473 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 C16orf82Q7Z2V1 217 aa7.26□□□□□ -1.25
PDPN-201ENST00000294489 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 CENPVL3A0A0U1RRI6 287 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 CXCL1P09341 107 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 OR10J4P0C629 311 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 FAM106CPP0CH98 169 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 COTL1Q14019 142 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 OR5T1Q8NG75 326 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 OR5AU1Q8NGC0 362 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 NRGNQ92686 78 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 DERL1Q9BUN8 251 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 FBN2P35556 2912 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 COL12A1Q99715 3063 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 A0A1W2PRE2 83 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 BRS3P32247 399 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
PDPN-201ENST00000294489 ZNF562Q6V9R5 426 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 STXBP6Q8NFX7 210 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 C11orf52Q96A22 123 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 PERPQ96FX8 193 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 FAM210BQ96KR6 192 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 C1RLQ9NZP8 487 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 A1L4Q6 167 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 NPFFO15130 113 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 TGOLN2O43493 480 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 ORM2P19652 201 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 LINC00305Q7Z4B0 112 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 OR1B1Q8NGR6 318 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 SLC25A2Q9BXI2 301 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 CBY1Q9Y3M2 126 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 NAV3Q8IVL0 2385 aa7.25□□□□□ -1.25
PDPN-201ENST00000294489 TRBV24-1A0A075B6N3 115 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 TRAV5A0A0B4J249 113 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 CD99P14209 185 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 GALR1P47211 349 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 PATE2Q6UY27 113 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 MBD6Q96DN6 1003 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 FAM167A-AS1Q96KT0 104 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 SSX3Q99909 188 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 PAXXQ9BUH6 204 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 UTP20O75691 2785 aaKnown RBP7.24□□□□□ -1.25
PDPN-201ENST00000294489 PLXNB1O43157 2135 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 I3L2K1 104 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 HYPMO75409 117 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 FABP1P07148 127 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 CX3CL1P78423 397 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 ARPC1AQ92747 370 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 FAM103A1Q9BTL3 118 aaKnown RBP7.24□□□□□ -1.25
PDPN-201ENST00000294489 OR51M1Q9H341 326 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 DMRT1Q9Y5R6 373 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 ZFYVE26Q68DK2 2539 aa7.24□□□□□ -1.25
PDPN-201ENST00000294489 MSMBP08118 114 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 GATA3P23771 443 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 SAA4P35542 130 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 SUMO1P63165 101 aaKnown RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 CLEC12BQ2HXU8 276 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 RUSC1-AS1Q66K80 236 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 NECAP1Q8NC96 275 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 PSMG3-AS1Q96PY0 264 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 RASL11BQ9BPW5 248 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 MEGF9Q9H1U4 602 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms