RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TCTAP57738 103 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 OR1L4Q8NGR5 311 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 TMEM70Q9BUB7 260 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 C2orf83Q53S99 150 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 C19orf24Q9BVV8 132 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
CCNF-201ENST00000293968 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
CCNF-201ENST00000293968 MUC3AQ02505 3323 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 P01737 135 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 ZNF329Q86UD4 541 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.94□□□□□ -0.5
CCNF-201ENST00000293968 ALKBH7Q9BT30 221 aaPredicted RBP11.94□□□□□ -0.5
CCNF-201ENST00000293968 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 POLEQ07864 2286 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 TNFSF4P23510 183 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 COX11Q9Y6N1 276 aa11.94□□□□□ -0.5
CCNF-201ENST00000293968 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 E7EUB6 86 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 SNAI2O43623 268 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 NUDT3O95989 172 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 PRB3Q04118 309 aaPredicted RBP11.93□□□□□ -0.5
CCNF-201ENST00000293968 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 ZNF596Q8TC21 504 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 ZNF71Q9NQZ8 489 aaPredicted RBP11.93□□□□□ -0.5
CCNF-201ENST00000293968 ZNF257Q9Y2Q1 563 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 SLC25A17O43808 307 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 LEPROTL1O95214 131 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCNF-201ENST00000293968 LINC00173Q6ZV60 143 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 FAM167A-AS1Q96KT0 104 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 MRPL27Q9P0M9 148 aaKnown RBP11.93□□□□□ -0.5
CCNF-201ENST00000293968 ZNF318Q5VUA4 2279 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
CCNF-201ENST00000293968 OR8B3Q8NGG8 313 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 NAV3Q8IVL0 2385 aa11.93□□□□□ -0.5
CCNF-201ENST00000293968 HBBP68871 147 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 ASCL2Q99929 193 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 DEFB109BQ30KR1 87 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 DIAPH2-AS1Q14236 149 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 ZNF841Q6ZN19 808 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 FNDC4Q9H6D8 234 aaPredicted RBP11.92□□□□□ -0.5
CCNF-201ENST00000293968 SLC25A15Q9Y619 301 aa11.92□□□□□ -0.5
CCNF-201ENST00000293968 LOXL4Q96JB6 756 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 RPUSD1Q9UJJ7 312 aaKnown RBP11.91□□□□□ -0.5
CCNF-201ENST00000293968 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
CCNF-201ENST00000293968 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 IGLV1-44P01699 117 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 CD59P13987 128 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 NKX6-3A6NJ46 265 aa11.91□□□□□ -0.5
CCNF-201ENST00000293968 GSX1Q9H4S2 264 aaPredicted RBP11.91□□□□□ -0.5
CCNF-201ENST00000293968 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 COL8A1P27658 744 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 WT1-ASQ06250 92 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 FNDC10F2Z333 226 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 CCL17Q92583 94 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 PLSCR4Q9NRQ2 329 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
CCNF-201ENST00000293968 LOC400499M0QZD8 3231 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 ASPMQ8IZT6 3477 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 HTR1DP28221 377 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.5
CCNF-201ENST00000293968 GLRXP35754 106 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 SLC25A48Q6ZT89 311 aaKnown RBP11.9□□□□□ -0.5
CCNF-201ENST00000293968 PERPQ96FX8 193 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
CCNF-201ENST00000293968 SH3BGRL2Q9UJC5 107 aa11.9□□□□□ -0.5
CCNF-201ENST00000293968 TCRBV4S1A1TA0A5B7 111 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 A8MWL6 223 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 LYZP61626 148 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 PRNTQ86SH4 94 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 PCNX1Q96RV3 2341 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 IGHV1-46P01743 117 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 CGB3P0DN86 165 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 CGB7P0DN87 165 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 GAL3ST2Q9H3Q3 398 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 SLC25A34Q6PIV7 304 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 GPR82Q96P67 336 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 TMEM191AQ9H0A3 160 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 IGHV1-69-2A0A0G2JMI3 117 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 OSR1Q8TAX0 266 aaPredicted RBP11.89□□□□□ -0.51
CCNF-201ENST00000293968 FXYD5Q96DB9 178 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 NDUFA4L2Q9NRX3 87 aa11.89□□□□□ -0.51
CCNF-201ENST00000293968 CR1LQ2VPA4 569 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms