RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SEPSECSQ9HD40 501 aaKnown RBP13.43□□□□□ -0.26
SSRP1-202ENST00000293880 PAX1P15863 534 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 VDAC2P45880 294 aaPredicted RBP13.43□□□□□ -0.26
SSRP1-202ENST00000293880 DPM3Q9P2X0 92 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 GTF3AQ92664 365 aaKnown RBP13.42□□□□□ -0.26
SSRP1-202ENST00000293880 UCP1P25874 307 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 LTBRP36941 435 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 C5orf24Q7Z6I8 188 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 LINC00158P58513 81 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 HSD52Q0P140 79 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SSRP1-202ENST00000293880 BMPERQ8N8U9 685 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
SSRP1-202ENST00000293880 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
SSRP1-202ENST00000293880 UBE2V1Q13404 147 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 LY6G6FQ5SQ64 297 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 C1QTNF5Q9BXJ0 243 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 UPK2O00526 184 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 GUSBP1Q15486 140 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 HAPLN4Q86UW8 402 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 TMEM167AQ8TBQ9 72 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 MBNL3Q9NUK0 354 aaKnown RBP13.41□□□□□ -0.26
SSRP1-202ENST00000293880 NAPSAO96009 420 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 ZNF236Q9UL36 1845 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 RBBP6Q7Z6E9 1792 aaKnown RBP13.41□□□□□ -0.26
SSRP1-202ENST00000293880 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 C15orf61A6NNL5 157 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 TNFSF13O75888 250 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 IGFL4Q6B9Z1 124 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 EREGO14944 169 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 FAM168AQ92567 244 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
SSRP1-202ENST00000293880 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 TM4SF5O14894 197 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 TOMM40O96008 361 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 HGFACQ04756 655 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 PSG8Q9UQ74 426 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 NPIPB5A8MRT5 1133 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 IGFBP3P17936 291 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 TIMP3P35625 211 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 SS18L2Q9UHA2 77 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 MS4A6AQ9H2W1 248 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 H0YIZ8 118 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 MGST2Q99735 147 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 PRB2P02812 416 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 LGALS1P09382 135 aaKnown RBP13.4□□□□□ -0.26
SSRP1-202ENST00000293880 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
SSRP1-202ENST00000293880 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 NBR2O15453 112 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 IGHV3-53P01767 116 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 EFNB3Q15768 340 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 APC2O95996 2303 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 FABP5P3A8MUU1 101 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 RNF125Q96EQ8 232 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 YAE1D1Q9NRH1 226 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 TRGV4A0A0C4DH28 118 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 KIR3DS1Q14943 382 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.39□□□□□ -0.27
SSRP1-202ENST00000293880 MDC1Q14676 2089 aaKnown RBP13.39□□□□□ -0.27
SSRP1-202ENST00000293880 D6R8Y8 96 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 MLNRO43193 412 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 SEC11AP67812 179 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 MORN2Q502X0 79 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF497Q6ZNH5 498 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 GFI1Q99684 422 aa13.39□□□□□ -0.27
SSRP1-202ENST00000293880 A0A1W2PRE2 83 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 TCRAP04437 139 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
SSRP1-202ENST00000293880 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 BOD1L2Q8IYS8 172 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 MYOD1P15172 320 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 HEPN1Q6WQI6 88 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 FGFBP3Q8TAT2 258 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 PLNP26678 52 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 RHOGP84095 191 aa13.38□□□□□ -0.27
SSRP1-202ENST00000293880 VWC2LB2RUY7 222 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 KLRD1Q13241 179 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 TMEM256Q8N2U0 113 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 RPUSD1Q9UJJ7 312 aaKnown RBP13.37□□□□□ -0.27
SSRP1-202ENST00000293880 A0A1B0GTI1 187 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 IQCF6A8MYZ5 107 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 C9JAW5 83 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 PEMTQ9UBM1 199 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
SSRP1-202ENST00000293880 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 CRPP02741 224 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 CCL1P22362 96 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 NDPQ00604 133 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 MESP1Q9BRJ9 268 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 TRBV6-7A0A0A0MS04 114 aa13.37□□□□□ -0.27
SSRP1-202ENST00000293880 ZNF114Q8NC26 417 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms