RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 SLC25A2Q9BXI2 301 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 IGHV1-69DA0A0B4J2H0 117 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 IGHV1-69P01742 117 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
HIF3A-203ENST00000291300 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
HIF3A-203ENST00000291300 LINC01548A6NM66 108 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 ZNF343Q6P1L6 599 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 FAM24BQ8N5W8 94 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 FANCD2OSQ96PS1 177 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 SSX3Q99909 188 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
HIF3A-203ENST00000291300 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 OR7C2O60412 319 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 NDUFB4O95168 129 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 MSMBP08118 114 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 PAX1P15863 534 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 ORM2P19652 201 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 OR5T1Q8NG75 326 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 YPEL4Q96NS1 127 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 TRGV9Q99603 122 aa13.18□□□□□ -0.3
HIF3A-203ENST00000291300 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-203ENST00000291300 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
HIF3A-203ENST00000291300 A0A096LNT2 108 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 CORTO00230 105 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 IGLC1P0CG04 106 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 PYYP10082 97 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 TIGITQ495A1 244 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 PIFOQ8TCI5 191 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 ZNF355PQ9NSJ1 428 aa13.17□□□□□ -0.3
HIF3A-203ENST00000291300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.16□□□□□ -0.3
HIF3A-203ENST00000291300 OR2C1O95371 312 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 CRYBA1P05813 215 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 RPL23P62829 140 aaKnown RBP13.16□□□□□ -0.3
HIF3A-203ENST00000291300 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 TRBV20OR9-2A0A075B6H5 130 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 IGKV1-17P01599 117 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 BRS3P32247 399 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 ADIRFQ15847 76 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 TMEM241Q24JQ0 296 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 HIST2H2BCQ6DN03 193 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 NAT8Q9UHE5 227 aa13.16□□□□□ -0.3
HIF3A-203ENST00000291300 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 NANPQ8TBE9 248 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 RBM14Q96PK6 669 aaKnown RBP13.15□□□□□ -0.3
HIF3A-203ENST00000291300 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 DOPEY2Q9Y3R5 2298 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 NPIPB5A8MRT5 1133 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 PSG1P11464 419 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 SELENOTP62341 195 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 RNF212Q495C1 297 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 C19orf24Q9BVV8 132 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 URGCP-MRPS24S4R325 110 aa13.15□□□□□ -0.3
HIF3A-203ENST00000291300 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 PDE6DO43924 150 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 CLN5O75503 358 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 HLA-DRB1P01911 266 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 C22orf15Q8WYQ4 148 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
HIF3A-203ENST00000291300 APCP25054 2843 aa13.14□□□□□ -0.31
HIF3A-203ENST00000291300 A0A087WWC5 75 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 GGTLC3B5MD39 225 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-203ENST00000291300 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 NDUFB8O95169 186 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 RASL11BQ9BPW5 248 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 AMY1AP04745 511 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 CXCL1P09341 107 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 PNRC1Q12796 327 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-203ENST00000291300 BCL6BQ8N143 479 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-203ENST00000291300 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 PFDN5Q99471 154 aa13.13□□□□□ -0.31
HIF3A-203ENST00000291300 B4DSR2 109 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 G3V318 75 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 OR2J3O76001 311 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 DSCR9P59020 149 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 TAS2R45P59539 299 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 ZFP82Q8N141 532 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 Q8WTZ3 238 aa13.12□□□□□ -0.31
HIF3A-203ENST00000291300 TMEM167BQ9NRX6 74 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms