RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 Q8N9W7 124 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 OR5AU1Q8NGC0 362 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 ARPC1AQ92747 370 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 C11orf52Q96A22 123 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 ZNF355PQ9NSJ1 428 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 URGCP-MRPS24S4R325 110 aa7.59□□□□□ -1.2
TRIM55-201ENST00000276573 NAV3Q8IVL0 2385 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 TACC2O95359 2948 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 A0A1W2PRE2 83 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 NPIPB5A8MRT5 1133 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 HYPMO75409 117 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 OR10J4P0C629 311 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 IGLC1P0CG04 106 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 ORM2P19652 201 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 PLP1P60201 277 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 RAB5BP61020 215 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 LINC01551Q86U37 167 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 TTC9CQ8N5M4 171 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 SSX3Q99909 188 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 OR51M1Q9H341 326 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 USP24Q9UPU5 2620 aa7.58□□□□□ -1.2
TRIM55-201ENST00000276573 TGIF2-C20orf24A0A0A6YYL0 155 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 EGR2P11161 476 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 NDPQ00604 133 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 C1QL4Q86Z23 238 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 OR5T1Q8NG75 326 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 OR1B1Q8NGR6 318 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 ANAPC16Q96DE5 110 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 PERPQ96FX8 193 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 PAXXQ9BUH6 204 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 IGHV7-81A0A0B4J1V7 117 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 PSG1P11464 419 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 COX6B1P14854 86 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 PAX1P15863 534 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 DSCR9P59020 149 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 TIGITQ495A1 244 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 OCC1Q8TAD7 63 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 C2CD4CQ8TF44 421 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 NRGNQ92686 78 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 RBM14Q96PK6 669 aaKnown RBP7.57□□□□□ -1.2
TRIM55-201ENST00000276573 BIN3Q9NQY0 253 aa7.57□□□□□ -1.2
TRIM55-201ENST00000276573 IGLV11-55A0A075B6I3 123 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 IGHV1-69DA0A0B4J2H0 117 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 H7BYZ3 331 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 IGKV1-17P01599 117 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 IGHV1-69P01742 117 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 HLA-DRB1P01911 266 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 PYYP10082 97 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 CRYBB3P26998 211 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
TRIM55-201ENST00000276573 STXBP6Q8NFX7 210 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 FXYD5Q96DB9 178 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 FAM210BQ96KR6 192 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 RASL11BQ9BPW5 248 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-201ENST00000276573 DOPEY1Q5JWR5 2465 aa7.56□□□□□ -1.2
TRIM55-201ENST00000276573 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 TRBV24-1A0A075B6N3 115 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 HELTA6NFD8 242 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 RPL35P42766 123 aaKnown RBP7.55□□□□□ -1.2
TRIM55-201ENST00000276573 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 SAV1Q9H4B6 383 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-201ENST00000276573 LY96Q9Y6Y9 160 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 IGHV3OR16-10A0A075B7F0 116 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 TRAV30A0A087WSZ9 112 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 C9JCJ5 164 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 FABP1P07148 127 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 RD3LP0DJH9 198 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 CD99P14209 185 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 GALR1P47211 349 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 MFAP4P55083 255 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 SMUG1Q53HV7 270 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 OR5B12Q96R08 314 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 ELOVL1Q9BW60 279 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 MEGF9Q9H1U4 602 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 MRPL27Q9P0M9 148 aaKnown RBP7.55□□□□□ -1.2
TRIM55-201ENST00000276573 HIGD1AQ9Y241 93 aa7.55□□□□□ -1.2
TRIM55-201ENST00000276573 WNK2Q9Y3S1 2297 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 A1L4Q6 167 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 NDUFB8O95169 186 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 MSMBP08118 114 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 S100PP25815 95 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 LYZP61626 148 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
TRIM55-201ENST00000276573 PIFOQ8TCI5 191 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms