RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 ISOC2Q96AB3 205 aa16.87■□□□□ 0.29
GFRA3-201ENST00000274721 TMEM167BQ9NRX6 74 aa16.87■□□□□ 0.29
GFRA3-201ENST00000274721 FBN2P35556 2912 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 F6UZH7 168 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 IGLC1P0CG04 106 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 EGR2P11161 476 aaPredicted RBP16.86■□□□□ 0.29
GFRA3-201ENST00000274721 SLC25A16P16260 332 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 ATF4P18848 351 aaPredicted RBP16.86■□□□□ 0.29
GFRA3-201ENST00000274721 CLEC12BQ2HXU8 276 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 ELOA3CA0A087WX78 387 aaPredicted RBP16.86■□□□□ 0.29
GFRA3-201ENST00000274721 COX7A2P2O60397 106 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 C10orf113Q5VZT2 155 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 FANCD2OSQ96PS1 177 aa16.86■□□□□ 0.29
GFRA3-201ENST00000274721 B4DSR2 109 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 BPIFB3P59826 476 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 PLP1P60201 277 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 KIAA0141Q14154 515 aaPredicted RBP16.85■□□□□ 0.29
GFRA3-201ENST00000274721 ZNF674Q2M3X9 581 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 YPEL4Q96NS1 127 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 SLC25A2Q9BXI2 301 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 DOK5Q9P104 306 aa16.85■□□□□ 0.29
GFRA3-201ENST00000274721 USP9YO00507 2555 aaPredicted RBP16.85■□□□□ 0.29
GFRA3-201ENST00000274721 IGLV11-55A0A075B6I3 123 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 MEGF9Q9H1U4 602 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 CSMD1Q96PZ7 3565 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 A0A096LNT2 108 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 TRAV40A0A0B4J280 105 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 LOC105371267A0A1B0GV96 52 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 OR7C2O60412 319 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 KLF17Q5JT82 389 aaPredicted RBP16.84■□□□□ 0.29
GFRA3-201ENST00000274721 HIST1H2BAQ96A08 127 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 GSX1Q9H4S2 264 aaPredicted RBP16.84■□□□□ 0.29
GFRA3-201ENST00000274721 TMEM242Q9NWH2 141 aa16.84■□□□□ 0.29
GFRA3-201ENST00000274721 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.84■□□□□ 0.29
GFRA3-201ENST00000274721 IGHV3OR16-10A0A075B7F0 116 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 TRAV5A0A0B4J249 113 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 CXorf65A6NEN9 183 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 NDUFB4O95168 129 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 OR2C1O95371 312 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 UHRF2Q96PU4 802 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 RASL11BQ9BPW5 248 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 ZNF355PQ9NSJ1 428 aa16.83■□□□□ 0.28
GFRA3-201ENST00000274721 MT-ND4LP03901 98 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 COL8A1P27658 744 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 RPL23P62829 140 aaKnown RBP16.82■□□□□ 0.28
GFRA3-201ENST00000274721 PIFOQ8TCI5 191 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 HSPB9Q9BQS6 159 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 C7orf69Q9H7B7 122 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 CELSR2Q9HCU4 2923 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 ANKRD17O75179 2603 aaKnown RBP16.82■□□□□ 0.28
GFRA3-201ENST00000274721 IGKV1-17P01599 117 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 IGHV4-38-2P0DP08 117 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 KRTAP10-9P60411 292 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 BRD3OSQ6XYD6 125 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 LINC00305Q7Z4B0 112 aa16.82■□□□□ 0.28
GFRA3-201ENST00000274721 FAM24BQ8N5W8 94 aa16.81■□□□□ 0.28
GFRA3-201ENST00000274721 OR5AU1Q8NGC0 362 aa16.81■□□□□ 0.28
GFRA3-201ENST00000274721 HIF1ANQ9NWT6 349 aa16.81■□□□□ 0.28
GFRA3-201ENST00000274721 CSMD2Q7Z408 3487 aa16.81■□□□□ 0.28
GFRA3-201ENST00000274721 POLQO75417 2590 aa16.81■□□□□ 0.28
GFRA3-201ENST00000274721 CRYBA1P05813 215 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 OR10J4P0C629 311 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 FOLR2P14207 255 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 ORM2P19652 201 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 SGMS2Q8NHU3 365 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 C11orf52Q96A22 123 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 RBM14Q96PK6 669 aaKnown RBP16.8■□□□□ 0.28
GFRA3-201ENST00000274721 DERL1Q9BUN8 251 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 A0A0U1RQK1 487 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 SCO2A0A1W2PP80 73 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 A0A1W2PRE2 83 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 PSG1P11464 419 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 GATA3P23771 443 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 RNF212Q495C1 297 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 OR1B1Q8NGR6 318 aa16.8■□□□□ 0.28
GFRA3-201ENST00000274721 TRAV20A0A0B4J274 112 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 HYPMO75409 117 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 ADIRFQ15847 76 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 KLK9Q2XQG4 91 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 TIGITQ495A1 244 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 ZNF48Q96MX3 618 aaPredicted RBP16.79■□□□□ 0.28
GFRA3-201ENST00000274721 KLK9Q9UKQ9 250 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 MAP1AP78559 2803 aaPredicted RBP16.79■□□□□ 0.28
GFRA3-201ENST00000274721 CENPEQ02224 2701 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 CHD6Q8TD26 2715 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 C5orf56Q8N8D9 126 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 CTDSP1Q9GZU7 261 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 PRELID1Q9Y255 219 aa16.79■□□□□ 0.28
GFRA3-201ENST00000274721 OR5T1Q8NG75 326 aa16.78■□□□□ 0.28
GFRA3-201ENST00000274721 PAXXQ9BUH6 204 aa16.78■□□□□ 0.28
GFRA3-201ENST00000274721 OR51M1Q9H341 326 aa16.78■□□□□ 0.28
GFRA3-201ENST00000274721 AVPP01185 164 aa16.77■□□□□ 0.28
GFRA3-201ENST00000274721 THYN1Q9P016 225 aa16.77■□□□□ 0.28
GFRA3-201ENST00000274721 KMT2BQ9UMN6 2715 aaPredicted RBP16.77■□□□□ 0.28
GFRA3-201ENST00000274721 TRBV20OR9-2A0A075B6H5 130 aa16.77■□□□□ 0.27
GFRA3-201ENST00000274721 CLDN34H7C241 214 aa16.77■□□□□ 0.27
GFRA3-201ENST00000274721 PYYP10082 97 aa16.77■□□□□ 0.27
GFRA3-201ENST00000274721 UBE2L3P68036 154 aaKnown RBP16.77■□□□□ 0.27
GFRA3-201ENST00000274721 ELOBQ15370 118 aa16.77■□□□□ 0.27
GFRA3-201ENST00000274721 LINC01551Q86U37 167 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms