RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM90A9PA6NNJ1 464 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 CCL13Q99616 98 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 A0A087X0K7 114 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 A0A1W2PRE2 83 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 ZNF891A8MT65 544 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-202ENST00000273342 H0YJW9 148 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 SAA1P0DJI8 122 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-202ENST00000273342 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-202ENST00000273342 Q6ZT83 130 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 GAL3ST2Q9H3Q3 398 aa10.49□□□□□ -0.73
COL8A1-202ENST00000273342 PEX7O00628 323 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 MOSP00540 346 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 SLC25A5P05141 298 aaKnown RBP10.48□□□□□ -0.73
COL8A1-202ENST00000273342 FOXE3Q13461 319 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 Q71RC1 249 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-202ENST00000273342 MUC15Q8N387 334 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 PPP1R35Q8TAP8 253 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 SRRM5B3KS81 715 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 TOMM40O96008 361 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 COMMD5Q9GZQ3 224 aa10.48□□□□□ -0.73
COL8A1-202ENST00000273342 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
COL8A1-202ENST00000273342 MRPL27Q9P0M9 148 aaKnown RBP10.48□□□□□ -0.73
COL8A1-202ENST00000273342 J3QW42 95 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 IGKV3-15P01624 115 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 RNASE2P10153 161 aaKnown RBP10.47□□□□□ -0.73
COL8A1-202ENST00000273342 PRCDQ00LT1 54 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 COX19Q49B96 90 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 ANKRD39Q53RE8 183 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 C10orf113Q5VZT2 155 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 C9orf106Q8NAJ2 232 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 MDS2Q8NDY4 140 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
COL8A1-202ENST00000273342 IGHV1-18A0A0C4DH31 117 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 PGPA6NDG6 321 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 UPK2O00526 184 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 CT45A6P0DMU7 189 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 CT45A5P0DMU8 189 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 CT45A7P0DMV0 189 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 SAPCD1Q5SSQ6 148 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 PEAR1Q5VY43 1037 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-202ENST00000273342 ZNF329Q86UD4 541 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 F2RL2O00254 374 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 LEPROTL1O95214 131 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 RUSC1-AS1Q66K80 236 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 PATE2Q6UY27 113 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 RBMXL3Q8N7X1 1067 aaKnown RBP10.47□□□□□ -0.73
COL8A1-202ENST00000273342 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
COL8A1-202ENST00000273342 IGHV1-24A0A0C4DH33 117 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 C21orf140B9A014 251 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 M0R1B8 84 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-202ENST00000273342 PRB3Q04118 309 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-202ENST00000273342 CD69Q07108 199 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 LINC00305Q7Z4B0 112 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 HARBI1Q96MB7 349 aa10.46□□□□□ -0.73
COL8A1-202ENST00000273342 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-202ENST00000273342 KBTBD11-OT1A0A1B0GTJ5 212 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 KIR2DS2P43631 304 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 DIAPH2-AS1Q14236 149 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 HCP5Q6MZN7 132 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 UBALD2Q8IYN6 164 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 TPPP3Q9BW30 176 aa10.46□□□□□ -0.74
COL8A1-202ENST00000273342 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 NKX2-8O15522 239 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 CDKN1BP46527 198 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 UQCRFS1P47985 274 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 ZCCHC24Q8N2G6 241 aaKnown RBP10.45□□□□□ -0.74
COL8A1-202ENST00000273342 GSX1Q9H4S2 264 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-202ENST00000273342 ZNF835Q9Y2P0 537 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 SYS1-DBNDD2H3BUS1 97 aa10.45□□□□□ -0.74
COL8A1-202ENST00000273342 HIST1H1EP10412 219 aaKnown RBP10.44□□□□□ -0.74
COL8A1-202ENST00000273342 RTL8BQ17RB0 113 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 FLYWCH2Q96CP2 140 aaKnown RBP10.44□□□□□ -0.74
COL8A1-202ENST00000273342 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
COL8A1-202ENST00000273342 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 K7EP13 123 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 APOA2P02652 100 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 SPRY4Q9C004 299 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 ABCA4P78363 2273 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 HSBP1L1C9JCN9 74 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 KLK10O43240 276 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 FXYD7P58549 80 aa10.44□□□□□ -0.74
COL8A1-202ENST00000273342 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms