RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 UCP1P25874 307 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 DEFB1P60022 68 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
TPM3-201ENST00000271850 USF2Q15853 346 aaPredicted RBP6.43□□□□□ -1.38
TPM3-201ENST00000271850 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 LPCAT3Q6P1A2 487 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 GSG1LQ6UXU4 331 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 STHQ8IWL8 128 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 STXBP6Q8NFX7 210 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 OR52I2Q8NH67 350 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 GLMPQ8WWB7 406 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 ABHD1Q96SE0 405 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 FUNDC2Q9BWH2 189 aa6.43□□□□□ -1.38
TPM3-201ENST00000271850 C3orf85A0A1B0GTC6 90 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 C11orf94C9JXX5 98 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 NPIPB6E9PJ23 425 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 CD74P04233 296 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 CD5P06127 495 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 MIFP14174 115 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
TPM3-201ENST00000271850 TCTAP57738 103 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
TPM3-201ENST00000271850 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 FAAP20Q6NZ36 180 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 PRSS54Q6PEW0 395 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 C16orf54Q6UWD8 224 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 SLC35G3Q8N808 338 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 OR13C8Q8NGS7 320 aa6.42□□□□□ -1.38
TPM3-201ENST00000271850 ZNF486Q96H40 463 aaPredicted RBP6.42□□□□□ -1.38
TPM3-201ENST00000271850 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 IFNA17P01571 189 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 AMBPP02760 352 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 SPP1P10451 314 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 PGAM2P15259 253 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 NPPCP23582 126 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 OPRK1P41145 380 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 HOXA1P49639 335 aaPredicted RBP6.41□□□□□ -1.38
TPM3-201ENST00000271850 AKR1C2P52895 323 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 GDF5OSQ5U4N7 250 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 GLYATL2Q8WU03 294 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 METTL26Q96S19 204 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 RTBDNQ9BSG5 229 aaPredicted RBP6.41□□□□□ -1.38
TPM3-201ENST00000271850 MIXL1Q9H2W2 232 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 MTFP1Q9UDX5 166 aa6.41□□□□□ -1.38
TPM3-201ENST00000271850 FAM90A26D6RGX4 464 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 H3BMM0 161 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 CDS2O95674 445 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 OR5AC1P0C628 307 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 SNCAP37840 140 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 RND2P52198 227 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 DHODHQ02127 395 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 ID3Q02535 119 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 CTF1Q16619 201 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 RNASE10Q5GAN6 216 aaKnown RBP6.4□□□□□ -1.38
TPM3-201ENST00000271850 PSMG4Q5JS54 123 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 MORN3Q6PF18 240 aaPredicted RBP6.4□□□□□ -1.38
TPM3-201ENST00000271850 ARRDC1Q8N5I2 433 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 MARCH1Q8TCQ1 289 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 GPR146Q96CH1 333 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 RNF126Q9BV68 326 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 PRR13Q9NZ81 148 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 TBC1D24Q9ULP9 559 aa6.4□□□□□ -1.38
TPM3-201ENST00000271850 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.39
TPM3-201ENST00000271850 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.39
TPM3-201ENST00000271850 A0A087WXM4 84 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 A0A1W2PS18 150 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 CORTO00230 105 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 BUB3O43684 328 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 HNRNPCP07910 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
TPM3-201ENST00000271850 SMIM18P0DKX4 95 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 S100GP29377 79 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 SPCS3P61009 180 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 DHRS2Q13268 280 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 MEF2DQ14814 521 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TRIM16LQ309B1 348 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 C2orf83Q53S99 150 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TMEM41BQ5BJD5 291 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 ZNF705AQ6ZN79 300 aaPredicted RBP6.39□□□□□ -1.39
TPM3-201ENST00000271850 SELENOHQ8IZQ5 122 aaKnown RBP6.39□□□□□ -1.39
TPM3-201ENST00000271850 OR52E5Q8NH55 327 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TERB2Q8NHR7 220 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TMEM230Q96A57 120 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 C17orf77Q96MU5 243 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TMEM222Q9H0R3 208 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 EXTL2Q9UBQ6 330 aa6.39□□□□□ -1.39
TPM3-201ENST00000271850 MUC4Q99102 2169 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 IGKV1D-37A0A075B6S9 117 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 DEFB131BA0A096LNP1 70 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 SMIM31A0A1B0GVY4 71 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 HELTA6NFD8 242 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 ZNF705FA8MVS1 300 aaPredicted RBP6.38□□□□□ -1.39
TPM3-201ENST00000271850 SOCS3O14543 225 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 GABARAPO95166 117 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 IL4P05112 153 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 ZNF705DP0CH99 300 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms