RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CADP27708 2225 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 C5orf49A4QMS7 147 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 NPIPA3F8WFD2 350 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 ISLRO14498 428 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 CXCL13O43927 109 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 IMMP1LQ96LU5 166 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 SGK494Q96LW2 274 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 SAP30LQ9HAJ7 183 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 BRI3O95415 125 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 GUSBP1Q15486 140 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 C10orf128Q5T292 105 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 MRPL21Q7Z2W9 205 aaKnown RBP7.18□□□□□ -1.26
VAPB-201ENST00000265619 ABHD12Q8N2K0 398 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 TMEM54Q969K7 222 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 SNRNP40Q96DI7 357 aaKnown RBP7.18□□□□□ -1.26
VAPB-201ENST00000265619 LIN7CQ9NUP9 197 aaKnown RBP7.18□□□□□ -1.26
VAPB-201ENST00000265619 INSIG2Q9Y5U4 225 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 PINLYPA6NC86 204 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 FAM90A26D6RGX4 464 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 OR9G9P0C7N8 305 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 SMIM17P0DL12 118 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 ATP5IP56385 69 aaPredicted RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 SEC11AP67812 179 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 H1FXQ92522 213 aaKnown RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 SRSF8Q9BRL6 282 aaKnown RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 YAE1D1Q9NRH1 226 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 MPC1Q9Y5U8 109 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 TNRC6BQ9UPQ9 1833 aaKnown RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 ZGRF1Q86YA3 2104 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 AKAP6Q13023 2319 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 ZNF137PP52743 207 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 PSG5Q15238 335 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 CEACAM16Q2WEN9 425 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 PDLIM3Q53GG5 364 aaPredicted RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 VKORC1L1Q8N0U8 176 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 TMEM191AQ9H0A3 160 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 SH2D2AQ9NP31 389 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
VAPB-201ENST00000265619 SPENQ96T58 3664 aaKnown RBP7.17□□□□□ -1.26
VAPB-201ENST00000265619 CSN3P07498 182 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 OPRK1P41145 380 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 DEFB109BQ30KR1 87 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 MOB3BQ86TA1 216 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.16□□□□□ -1.26
VAPB-201ENST00000265619 DLL3Q9NYJ7 618 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 B4GALT7Q9UBV7 327 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 KLF13Q9Y2Y9 288 aaPredicted RBP7.16□□□□□ -1.26
VAPB-201ENST00000265619 F11RQ9Y624 299 aaKnown RBP7.16□□□□□ -1.26
VAPB-201ENST00000265619 KLRC4-KLRK1H3BQV0 150 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 TFF1P04155 84 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 OR1C1Q15619 314 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 RNF183Q96D59 192 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 DAZAP1Q96EP5 407 aaKnown RBP7.16□□□□□ -1.26
VAPB-201ENST00000265619 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 C1RLQ9NZP8 487 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PKDREJQ9NTG1 2253 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PTPRQQ9UMZ3 2332 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 LINC00473A8K010 186 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 HIGD1CA8MV81 97 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 FAM106CPP0CH98 169 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 MAGEA5P43359 124 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 REG1BP48304 166 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 AESQ08117 197 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 TCF15Q12870 199 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 FOXC1Q12948 553 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 C5orf64Q2M2E5 130 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 ETDBQ3ZM63 59 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 TIGITQ495A1 244 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 FAM106AQ4KMX7 169 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PRSS33Q8NF86 280 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 DDB2Q92466 427 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 TTTY13Q9BZ97 58 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PCSK5Q92824 1860 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 PTPRBP23467 1997 aa7.16□□□□□ -1.26
VAPB-201ENST00000265619 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 TMEM189A5PLL7 270 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 ANKRD30BLA7E2S9 258 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 C16orf97H3BN30 126 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 HAX1O00165 279 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 LIFP15018 202 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 MORN5Q5VZ52 161 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 Q71RC1 249 aaPredicted RBP7.15□□□□□ -1.26
VAPB-201ENST00000265619 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 C20orf78Q9BR46 151 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 TMUB1Q9BVT8 246 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 PSG8Q9UQ74 426 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 SMG1Q96Q15 3661 aaKnown RBP7.15□□□□□ -1.26
VAPB-201ENST00000265619 OR2J3O76001 311 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 TSPAN13O95857 204 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 FXYD7P58549 80 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 LTC4SQ16873 150 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms