RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FNDC10F2Z333 226 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 F8W036 122 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 NBR2O15453 112 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 MPDU1O75352 247 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 IFNA4P05014 189 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 SNRNP70P08621 437 aaKnown RBP10.39□□□□□ -0.75
SGCA-201ENST00000262018 RPL27AP46776 148 aaKnown RBP10.39□□□□□ -0.75
SGCA-201ENST00000262018 ZNF616Q08AN1 781 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 Q8N6K4 173 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 LINC00482Q8N8I6 264 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 OR10W1Q8NGF6 305 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 NKX6-2Q9C056 277 aaPredicted RBP10.39□□□□□ -0.75
SGCA-201ENST00000262018 FBXL15Q9H469 300 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 KCNIP2Q9NS61 270 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 WDR83OSQ9Y284 106 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
SGCA-201ENST00000262018 TSSC4Q9Y5U2 329 aaPredicted RBP10.39□□□□□ -0.75
SGCA-201ENST00000262018 LYSTQ99698 3801 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 FGF7P21781 194 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 WT1-ASQ06250 92 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 MMDQ15546 238 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 TNXAQ16473 311 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 Q6ZS46 218 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
SGCA-201ENST00000262018 MRPL41Q8IXM3 137 aaKnown RBP10.38□□□□□ -0.75
SGCA-201ENST00000262018 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
SGCA-201ENST00000262018 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
SGCA-201ENST00000262018 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 ACTL6BO94805 426 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 FAM106CPP0CH98 169 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
SGCA-201ENST00000262018 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 KHDC1LQ5JSQ8 128 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 ADAMTSL5Q6ZMM2 481 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
SGCA-201ENST00000262018 IGLC7A0M8Q6 106 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 A6NDX4 124 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 FCN1O00602 326 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 CD24P25063 80 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 FHITP49789 147 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 DEFA5Q01523 94 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 HES1Q14469 280 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 HNF4GQ14541 408 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 GUK1Q16774 197 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 ZNF114Q8NC26 417 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 OR10G4Q8NGN3 311 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
SGCA-201ENST00000262018 MCRIP2Q9BUT9 160 aaKnown RBP10.36□□□□□ -0.75
SGCA-201ENST00000262018 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 NPVFQ9HCQ7 196 aa10.36□□□□□ -0.75
SGCA-201ENST00000262018 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 IFNA1P01562 189 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 SUB1P53999 127 aaKnown RBP eCLIP10.35□□□□□ -0.75
SGCA-201ENST00000262018 BLCAPP62952 87 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 PLGLAQ15195 96 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 C5orf64Q2M2E5 130 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
SGCA-201ENST00000262018 PRR25Q96S07 402 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 P2RX4Q99571 388 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
SGCA-201ENST00000262018 SMCO3A2RU48 225 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 HSPB1P04792 205 aaKnown RBP10.34□□□□□ -0.75
SGCA-201ENST00000262018 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 TMEM11P17152 192 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
SGCA-201ENST00000262018 KHDC3LQ587J8 217 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 TMEM41BQ5BJD5 291 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 C16orf82Q7Z2V1 217 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 SRSF12Q8WXF0 261 aaKnown RBP10.34□□□□□ -0.75
SGCA-201ENST00000262018 CACNG8Q8WXS5 425 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
SGCA-201ENST00000262018 RPRMQ9NS64 109 aa10.34□□□□□ -0.75
SGCA-201ENST00000262018 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
SGCA-201ENST00000262018 PPT1P50897 306 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 GNB1P62873 340 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 ACSM6Q6P461 480 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 SPSB3Q6PJ21 355 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 TMEM144Q7Z5S9 345 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 MBD3L1Q8WWY6 194 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 RBM14Q96PK6 669 aaKnown RBP10.33□□□□□ -0.76
SGCA-201ENST00000262018 MGST2Q99735 147 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 SLC25A33Q9BSK2 321 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 AREGP15514 252 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 OPRK1P41145 380 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 RHEBQ15382 184 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 OR4X2Q8NGF9 303 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
SGCA-201ENST00000262018 HERC2O95714 4834 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
SGCA-201ENST00000262018 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
SGCA-201ENST00000262018 RBFOX3A6NFN3 312 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms