RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 TCRBV4S1A1TA0A5B7 111 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 ZNF98A6NK75 572 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 RNF223E7ERA6 249 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 H7BYZ3 331 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 TGOLN2O43493 480 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BKO60814 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 GGCTO75223 188 aaKnown RBP14.06□□□□□ -0.16
SSB-201ENST00000260956 ACTL6BO94805 426 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BJP06899 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BOP23527 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BBP33778 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 SUB1P53999 127 aaKnown RBP eCLIP14.06□□□□□ -0.163e-41■■■■■ 112.1
SSB-201ENST00000260956 HIST1H2BDP58876 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BCP62807 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 FABP9Q0Z7S8 132 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST2H2BEQ16778 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BHQ93079 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 RPEQ96AT9 228 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 ACY3Q96HD9 319 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BNQ99877 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 HIST1H2BMQ99879 126 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 ONECUT1Q9UBC0 465 aa14.06□□□□□ -0.16
SSB-201ENST00000260956 VWC2LB2RUY7 222 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 TRGC2P03986 189 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 REG1AP05451 166 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 PATE2Q6UY27 113 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 PQLC2Q6ZP29 291 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 C19orf35Q6ZS72 473 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 FAM168AQ92567 244 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 SSBP3Q9BWW4 388 aaPredicted RBP14.05□□□□□ -0.16
SSB-201ENST00000260956 SLC25A2Q9BXI2 301 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 TMEM167BQ9NRX6 74 aa14.05□□□□□ -0.16
SSB-201ENST00000260956 IFITM10A6NMD0 228 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 PRTN3P24158 256 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 AKR1D1P51857 326 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 FBLN7Q53RD9 439 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 CLEC2AQ6UVW9 174 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 PPP1R27Q86WC6 154 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 BPESC1Q9GZL8 116 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 NF1P21359 2839 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 GGTLC3B5MD39 225 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 C9JCJ5 164 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 TIMM23O14925 209 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 MT-CO2P00403 227 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 TYMSP04818 313 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 S100A6P06703 90 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 C8orf88P0DMB2 117 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 HOXA5P20719 270 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 TNXAQ16473 311 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 KIR3DL3Q8N743 410 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 OR1P1Q8NH06 330 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 RNF2Q99496 336 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 SRD5A3Q9H8P0 318 aa14.04□□□□□ -0.16
SSB-201ENST00000260956 SETD2Q9BYW2 2564 aaPredicted RBP14.03□□□□□ -0.16
SSB-201ENST00000260956 LOC105371242A0A075B767 164 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 SMAD7O15105 426 aaKnown RBP14.03□□□□□ -0.16
SSB-201ENST00000260956 GALR1P47211 349 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 ZNF90Q03938 601 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 KLRD1Q13241 179 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 C1orf122Q6ZSJ8 110 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 TMEM116Q8NCL8 245 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 FRZBQ92765 325 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 FBXL15Q9H469 300 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 F11RQ9Y624 299 aaKnown RBP14.03□□□□□ -0.16
SSB-201ENST00000260956 LY96Q9Y6Y9 160 aa14.03□□□□□ -0.16
SSB-201ENST00000260956 FCN1O00602 326 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 NDUFA3O95167 84 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 SRP14P37108 136 aaKnown RBP14.02□□□□□ -0.16
SSB-201ENST00000260956 MEOX2P50222 304 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 PDLIM4P50479 330 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 ARF6P62330 175 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 MRPL41Q8IXM3 137 aaKnown RBP14.02□□□□□ -0.16
SSB-201ENST00000260956 TRGV9Q99603 122 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 SRSF8Q9BRL6 282 aaKnown RBP14.02□□□□□ -0.16
SSB-201ENST00000260956 DPM3Q9P2X0 92 aa14.02□□□□□ -0.16
SSB-201ENST00000260956 NSD1Q96L73 2696 aaPredicted RBP14.02□□□□□ -0.17
SSB-201ENST00000260956 IGHV4-61A0A0C4DH41 118 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 K7EN84 100 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 IGHV3-48P01763 117 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 HTR1DP28221 377 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 TAS2R45P59539 299 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 SELENOTP62341 195 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 LURAP1LQ8IV03 231 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 NPBQ8NG41 125 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 SRSF12Q8WXF0 261 aaKnown RBP14.01□□□□□ -0.17
SSB-201ENST00000260956 GSX1Q9H4S2 264 aaPredicted RBP14.01□□□□□ -0.17
SSB-201ENST00000260956 DNAJC4Q9NNZ3 241 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 CR1P17927 2039 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 ABCA1O95477 2261 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 TRAV5A0A0B4J249 113 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 A0A1W2PRE2 83 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 S100A8P05109 93 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
SSB-201ENST00000260956 LGALS4P56470 323 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 DSCR9P59020 149 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 KRTAP1-1Q07627 177 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 LHFPL4Q7Z7J7 247 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms