RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 ZNF785A8K8V0 405 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 SP9P0CG40 484 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 GPR183P32249 361 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 PTPN13Q12923 2485 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 LY6G6EA0A0G2JKS1 128 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 C15orf62A8K5M9 175 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 C21orf140B9A014 251 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 SRSF9Q13242 221 aaKnown RBP eCLIP12.3□□□□□ -0.44
KCTD3-201ENST00000259154 RIGQ13278 110 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 PKIBQ9C010 78 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 U3KQA8 63 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 IGLL1P15814 213 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 C20orf144Q9BQM9 153 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 TANC2Q9HCD6 1990 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 PEX7O00628 323 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 S100A4P26447 101 aaKnown RBP12.29□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 PERPQ96FX8 193 aa12.29□□□□□ -0.44
KCTD3-201ENST00000259154 MGST3O14880 152 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 FAM216BQ8N7L0 139 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 SNRNP40Q96DI7 357 aaKnown RBP12.28□□□□□ -0.44
KCTD3-201ENST00000259154 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 DNPH1O43598 174 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 NBEAP1P0C6P0 100 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 SLAQ13239 276 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 ZNF502Q8TBZ5 544 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
KCTD3-201ENST00000259154 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM160Q9NX00 188 aa12.28□□□□□ -0.44
KCTD3-201ENST00000259154 TRBV9A0A0B4J1U6 114 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 A1L4Q6 167 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 WFDC12Q8WWY7 111 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 GNB1LQ9BYB4 327 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.44
KCTD3-201ENST00000259154 NCKAP5O14513 1909 aa12.27□□□□□ -0.44
KCTD3-201ENST00000259154 C1orf185Q5T7R7 199 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 RASL11BQ9BPW5 248 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
KCTD3-201ENST00000259154 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 CACNG7P62955 275 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 SMIM12Q96EX1 92 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 KIAA1549Q9HCM3 1950 aa12.27□□□□□ -0.45
KCTD3-201ENST00000259154 NDUFB3O43676 98 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 FAM169BQ8N8A8 192 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 OR10AG1Q8NH19 301 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 TDGF1P13385 188 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 LGALS4P56470 323 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 LIPFP07098 398 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 FCGR2BP31994 310 aaPredicted RBP12.26□□□□□ -0.45
KCTD3-201ENST00000259154 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
KCTD3-201ENST00000259154 OCIAD2Q56VL3 154 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 ACP7Q6ZNF0 438 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 OR52E5Q8NH55 327 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 FAM168AQ92567 244 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 RPEQ96AT9 228 aa12.26□□□□□ -0.45
KCTD3-201ENST00000259154 ADAMTS20P59510 1910 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
KCTD3-201ENST00000259154 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 PRSS57Q6UWY2 283 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
KCTD3-201ENST00000259154 PPP1R14DQ9NXH3 145 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 SAMD13Q5VXD3 122 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 HIST1H4GQ99525 98 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 ZNF503-AS2A6NEH8 195 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 IL18BPO95998 194 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 FOXC1Q12948 553 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 C2orf83Q53S99 150 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 TMEM42Q69YG0 159 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 NDFIP1Q9BT67 221 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 PROK2Q9HC23 129 aa12.25□□□□□ -0.45
KCTD3-201ENST00000259154 CCL3L1P16619 93 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 GGNQ86UU5 652 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 ZNF414Q96IQ9 312 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 ONECUT1Q9UBC0 465 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 C9orf172C9J069 976 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 SCGB2A1O75556 95 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 ACP1P24666 158 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
KCTD3-201ENST00000259154 CSPG4Q6UVK1 2322 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 PRRG2O14669 202 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 CX3CL1P78423 397 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 PSG9Q00887 426 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 CIARTQ8N365 385 aaPredicted RBP12.24□□□□□ -0.45
KCTD3-201ENST00000259154 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
KCTD3-201ENST00000259154 INSIG2Q9Y5U4 225 aa12.23□□□□□ -0.45
KCTD3-201ENST00000259154 LOC102723996A0A087X1L8 192 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms