RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 GFRA4Q9GZZ7 299 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 COL5A3P25940 1745 aaPredicted RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 BDP1A6H8Y1 2624 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 C9JAW5 83 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 DUTP33316 252 aaKnown RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 CDKN1BP46527 198 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 CMC4P56277 68 aaPredicted RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 SLAQ13239 276 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 MRAPQ8TCY5 172 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 SPSB2Q99619 263 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 MUC21A0A0G2JKD1 596 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 MUC21A0A140T8X8 626 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 LINC00158P58513 81 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 SCARF2Q96GP6 870 aaPredicted RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 REG4Q9BYZ8 158 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 SPAG17Q6Q759 2223 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 TAF1LQ8IZX4 1826 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 IGKV1D-16P01601 117 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 ACYP1P07311 99 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 BTCP35070 178 aa6.85□□□□□ -1.31
DSG3-201ENST00000257189 TSSC4Q9Y5U2 329 aaPredicted RBP6.85□□□□□ -1.31
DSG3-201ENST00000257189 GAGE12HA6NDE8 117 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 C15orf61A6NNL5 157 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 H3BTX0 84 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 GTSCR1Q86UQ5 136 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 TTTY12Q9BZ98 90 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 SMCHD1A6NHR9 2005 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 IGHV3-72A0A0B4J1Y9 119 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 K7EP13 123 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 VCYO14598 125 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 ZIC3O60481 467 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 CCL1P22362 96 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 SPATA31B1PQ5VZV4 182 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 TCF20Q9UGU0 1960 aaKnown RBP6.84□□□□□ -1.31
DSG3-201ENST00000257189 A0A087X0K7 114 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
DSG3-201ENST00000257189 LINC01551Q86U37 167 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 FBXL7Q9UJT9 491 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
DSG3-201ENST00000257189 IGKV1D-42A0A075B6H8 117 aa6.84□□□□□ -1.32
DSG3-201ENST00000257189 GREM1O60565 184 aa6.84□□□□□ -1.32
DSG3-201ENST00000257189 EVI2AP22794 236 aa6.84□□□□□ -1.32
DSG3-201ENST00000257189 LINC01560Q8TB33 94 aa6.84□□□□□ -1.32
DSG3-201ENST00000257189 PEMTQ9UBM1 199 aa6.84□□□□□ -1.32
DSG3-201ENST00000257189 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 C12orf77C9JDV5 145 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 SIVA1O15304 175 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 FOXS1O43638 330 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 YPEL1O60688 119 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 IGHG4P01861 327 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 GFI1BQ5VTD9 330 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 OR13A1Q8NGR1 328 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 YPEL2Q96QA6 119 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 DPM3Q9P2X0 92 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 EREGO14944 169 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
DSG3-201ENST00000257189 OR11H6Q8NGC7 330 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 C8orf46Q8TAG6 207 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 TRGV3P03979 118 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 PCOLCEQ15113 449 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 EFNB3Q15768 340 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 ACP7Q6ZNF0 438 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 FAM89BQ8N5H3 189 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 KLF14Q8TD94 323 aaPredicted RBP6.83□□□□□ -1.32
DSG3-201ENST00000257189 ZNF646O15015 1829 aaPredicted RBP6.83□□□□□ -1.32
DSG3-201ENST00000257189 LAMA4Q16363 1823 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 REG1AP05451 166 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 CCL8P80075 99 aa6.83□□□□□ -1.32
DSG3-201ENST00000257189 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
DSG3-201ENST00000257189 A0A1W2PR77 199 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 PAX4O43316 350 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
DSG3-201ENST00000257189 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 C1QTNF4Q9BXJ3 329 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 PILRAQ9UKJ1 303 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 COL24A1Q17RW2 1714 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 J3KT08 172 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 IGHV2-70P01814 119 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 PRCDQ00LT1 54 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 LINC01587Q99440 93 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 LINC00312Q9Y6C7 94 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 FNDC10F2Z333 226 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 HRKO00198 91 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 CD7P09564 240 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 PEAR1Q5VY43 1037 aaPredicted RBP6.82□□□□□ -1.32
DSG3-201ENST00000257189 C1orf162Q8NEQ5 155 aaPredicted RBP6.82□□□□□ -1.32
DSG3-201ENST00000257189 NEU4Q8WWR8 484 aaPredicted RBP6.82□□□□□ -1.32
DSG3-201ENST00000257189 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
DSG3-201ENST00000257189 CENPVL1A0A0U1RR11 272 aa6.81□□□□□ -1.32
DSG3-201ENST00000257189 B9A039 149 aa6.81□□□□□ -1.32
DSG3-201ENST00000257189 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms