RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CD28P10747 220 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 EFNB3Q15768 340 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 OR9G4Q8NGQ1 327 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 MBD3L2Q8NHZ7 208 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-201ENST00000254630 IGKV1-12A0A0C4DH73 117 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 IGKV1D-12P01611 117 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 PRADC1Q9BSG0 188 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 CHTOPQ9Y3Y2 248 aaKnown RBP7.18□□□□□ -1.26
PTCD3-201ENST00000254630 TRBV7-9A0A0J9YWB2 115 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 B3GALT5-AS1P59052 145 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 VCX2Q9H322 139 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 JKAMPQ9P055 326 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 VWA8A3KMH1 1905 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 TRAV5A0A0B4J249 113 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 SRRM5B3KS81 715 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 H0YJW9 148 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 K7ERU9 68 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 MST1P26927 711 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 NEUROG1Q92886 237 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 ST6GALNAC6Q969X2 333 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 DMRT1Q9Y5R6 373 aa7.18□□□□□ -1.26
PTCD3-201ENST00000254630 RPL15P61313 204 aaKnown RBP7.17□□□□□ -1.26
PTCD3-201ENST00000254630 LINC00469Q8N7U9 141 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 SSBP4Q9BWG4 385 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-201ENST00000254630 IGKV1D-8A0A087WSZ0 117 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 SLC25A16P16260 332 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 C15orf32Q32M92 178 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 TTC32Q5I0X7 151 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 BRD3OSQ6XYD6 125 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 OOSP1A8MZH6 123 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
PTCD3-201ENST00000254630 RCHY1Q96PM5 261 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 FXYD7P58549 80 aa7.17□□□□□ -1.26
PTCD3-201ENST00000254630 RPUSD1Q9UJJ7 312 aaKnown RBP7.17□□□□□ -1.26
PTCD3-201ENST00000254630 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 TTC9CQ8N5M4 171 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SLC25A39Q9BZJ4 359 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 VSIRQ9H7M9 311 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 PEF1Q9UBV8 284 aaKnown RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SNAI2O43623 268 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 LILRA1O75019 489 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 C1QTNF9P0C862 333 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SELLP14151 372 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 COL8A2P25067 703 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 CTAG1AP78358 180 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 RNF5Q99942 180 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 C11orf68Q9H3H3 251 aaKnown RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 F2Z2F3 143 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 HEPN1Q6WQI6 88 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 FAM19A2Q8N3H0 131 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 MGST2Q99735 147 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 RLFQ13129 1914 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 F8VVB4 439 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 F8VWA3 439 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 H3BUX3 64 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 IGHG3P01860 377 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 BMPERQ8N8U9 685 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SSC4DQ8WTU2 575 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 OSTCQ9NRP0 149 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
PTCD3-201ENST00000254630 Q6P435 159 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 C1QL4Q86Z23 238 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SCRT1Q9BWW7 348 aa7.16□□□□□ -1.26
PTCD3-201ENST00000254630 SLC25A20O43772 301 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 CD5P06127 495 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 TMEM190Q8WZ59 177 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 C14orf144Q96I85 54 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 TRGV9Q99603 122 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 SEPSECSQ9HD40 501 aaKnown RBP7.15□□□□□ -1.26
PTCD3-201ENST00000254630 LY6G6FQ5SQ64 297 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 GFI1BQ5VTD9 330 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 SPATA31B1PQ5VZV4 182 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 SP5Q6BEB4 398 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-201ENST00000254630 LYPD2Q6UXB3 125 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 KLHL30-AS1Q8NEE0 82 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 PGPEP1LA6NFU8 196 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 ORMDL2Q53FV1 153 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 ZNF362Q5T0B9 420 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-201ENST00000254630 ASCL4Q6XD76 172 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 TMEM170AQ8WVE7 144 aa7.15□□□□□ -1.26
PTCD3-201ENST00000254630 MYLKQ15746 1914 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 DPM2O94777 84 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 IGHV4-39P01824 125 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 COQ2Q96H96 371 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 TREML4Q6UXN2 200 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 NUDT11Q96G61 164 aa7.15□□□□□ -1.27
PTCD3-201ENST00000254630 TOMM40O96008 361 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 HBDP02042 147 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 DTX1Q86Y01 620 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 KIAA1671Q9BY89 1806 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms