RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 HIGD1CA8MV81 97 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 PF4P02776 101 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 LYL1P12980 280 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 ASIPP42127 132 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 PRSS8Q16651 343 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 ZNF672Q499Z4 452 aaPredicted RBP9.53□□□□□ -0.88
NOD1-201ENST00000222823 Q6AWC8 147 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 REC114Q7Z4M0 266 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 TNFRSF14Q92956 283 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 SLC25A15Q9Y619 301 aa9.53□□□□□ -0.88
NOD1-201ENST00000222823 SOX21Q9Y651 276 aaPredicted RBP9.53□□□□□ -0.88
NOD1-201ENST00000222823 TCRBV4S1A1TA0A5B7 111 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 OR11H12B2RN74 326 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 EFNB3Q15768 340 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 GCSAMLQ5JQS6 135 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 LEMD1Q68G75 181 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 PVRIGQ6DKI7 326 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 OR11H1Q8NG94 326 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 OR11H2Q8NH07 326 aa9.52□□□□□ -0.88
NOD1-201ENST00000222823 GEMIN7Q9H840 131 aaKnown RBP9.52□□□□□ -0.88
NOD1-201ENST00000222823 TBL2Q9Y4P3 447 aaKnown RBP9.52□□□□□ -0.88
NOD1-201ENST00000222823 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 PYYP10082 97 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
NOD1-201ENST00000222823 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
NOD1-201ENST00000222823 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.89
NOD1-201ENST00000222823 B3GALT5-AS1P59052 145 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 C10orf55Q5SWW7 151 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
NOD1-201ENST00000222823 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 OTORQ9NRC9 128 aa9.52□□□□□ -0.89
NOD1-201ENST00000222823 RHOGP84095 191 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 PPP1R17O96001 155 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 OR4X2Q8NGF9 303 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 MALRD1Q5VYJ5 2156 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 H7C1H1 209 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 GNG5P63218 68 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 CIRBPQ14011 172 aaKnown RBP9.51□□□□□ -0.89
NOD1-201ENST00000222823 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 TMEM160Q9NX00 188 aa9.51□□□□□ -0.89
NOD1-201ENST00000222823 TRAV8-6A0A0B4J262 113 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 PGPEP1LA6NFU8 196 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 LILRA1O75019 489 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 HOXA5P20719 270 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 OCC1Q8TAD7 63 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 MYO18BQ8IUG5 2567 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 ORMDL3Q8N138 153 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 ARL6IP6Q8N6S5 226 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 PTPRSQ13332 1948 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 A0A1B0GW15 77 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 CD5P06127 495 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 C5orf24Q7Z6I8 188 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 IGKV1-5P01602 117 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 TMEM170BQ5T4T1 132 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 ITLN2Q8WWU7 325 aaPredicted RBP9.5□□□□□ -0.89
NOD1-201ENST00000222823 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 OSTCQ9NRP0 149 aa9.5□□□□□ -0.89
NOD1-201ENST00000222823 SRSF6Q13247 344 aaKnown RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 COTL1Q14019 142 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 Q6ZS92 163 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 SLC50A1Q9BRV3 221 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 MOB4Q9Y3A3 225 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 MBD3L4A6NDZ8 208 aaPredicted RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 MBD3L3A6NE82 208 aaPredicted RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 MBD3L5A6NJ08 208 aaPredicted RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 ATP5LO75964 103 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 ASCL4Q6XD76 172 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 MBD3L2Q8NHZ7 208 aaPredicted RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 C14orf144Q96I85 54 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 ZNF256Q9Y2P7 627 aaPredicted RBP9.49□□□□□ -0.89
NOD1-201ENST00000222823 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 PSMB11A5LHX3 300 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 TMEM178BH3BS89 294 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 IGHG3P01860 377 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 CTAG1AP78358 180 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 RNF138Q8WVD3 245 aa9.49□□□□□ -0.89
NOD1-201ENST00000222823 ASCL2Q99929 193 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms