RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 FOXG1P55316 489 aaPredicted RBP14.77□□□□□ -0.05
EXTL3-201ENST00000220562 CFHR1Q03591 330 aa14.77□□□□□ -0.05
EXTL3-201ENST00000220562 IGKV2-40A0A087WW87 121 aaPredicted RBP14.77□□□□□ -0.05
EXTL3-201ENST00000220562 TRAV2A0A0B4J234 112 aa14.77□□□□□ -0.05
EXTL3-201ENST00000220562 IGKV2D-40P01614 121 aaPredicted RBP14.77□□□□□ -0.05
EXTL3-201ENST00000220562 SPACA3Q8IXA5 215 aa14.77□□□□□ -0.05
EXTL3-201ENST00000220562 DOCK4Q8N1I0 1966 aa14.77□□□□□ -0.05
EXTL3-201ENST00000220562 EFNA2O43921 213 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 TRGV4A0A0C4DH28 118 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 PAX2Q02962 417 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 TRGV11A0A075B6L2 103 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 SPATA31B1PQ5VZV4 182 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 NABP1Q96AH0 204 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 CYSLTR1Q9Y271 337 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 E9PLN8 166 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 IGKCP01834 107 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 TMEM200BQ69YZ2 307 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 SEPSECSQ9HD40 501 aaKnown RBP14.76□□□□□ -0.05
EXTL3-201ENST00000220562 BRWD1Q9NSI6 2320 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 IGKV1-27A0A075B6S5 117 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 NTN3O00634 580 aaPredicted RBP14.76□□□□□ -0.05
EXTL3-201ENST00000220562 GZMBP10144 247 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 C3orf36Q3SXR2 165 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 PSMG4Q5JS54 123 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 C5orf30Q96GV9 206 aa14.76□□□□□ -0.05
EXTL3-201ENST00000220562 LCTP09848 1927 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 FGF16O43320 207 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 MBNL3Q9NUK0 354 aaKnown RBP14.75□□□□□ -0.05
EXTL3-201ENST00000220562 IGHV3-64A0A075B6Q5 118 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 KLRD1Q13241 179 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 TREML4Q6UXN2 200 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 SRSF7Q16629 238 aaKnown RBP eCLIP14.75□□□□□ -0.05
EXTL3-201ENST00000220562 RNF182Q8N6D2 247 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 DERL1Q9BUN8 251 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 TSKUQ8WUA8 353 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 NXT2Q9NPJ8 142 aaKnown RBP14.75□□□□□ -0.05
EXTL3-201ENST00000220562 TRAV41A0A0B4J266 112 aa14.75□□□□□ -0.05
EXTL3-201ENST00000220562 RPL15P61313 204 aaKnown RBP14.74□□□□□ -0.05
EXTL3-201ENST00000220562 CD59P13987 128 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 MST1P26927 711 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 CLDN16Q9Y5I7 305 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 WDR90Q96KV7 1748 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 TRAV8-2A0A0B4J237 113 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 OVOL1O14753 267 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HOXA3O43365 443 aaPredicted RBP14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BKO60814 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BJP06899 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BOP23527 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BBP33778 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BDP58876 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BCP62807 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST2H2BEQ16778 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 ORMDL2Q53FV1 153 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.74□□□□□ -0.05
EXTL3-201ENST00000220562 TEX38Q6PEX7 206 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BHQ93079 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 CHCHD1Q96BP2 118 aaKnown RBP14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BNQ99877 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 HIST1H2BMQ99879 126 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 TRAV9-2A0A087WT02 112 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 WDR83OSQ9Y284 106 aa14.74□□□□□ -0.05
EXTL3-201ENST00000220562 SELLP14151 372 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 GTSCR1Q86UQ5 136 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 TNFRSF14Q92956 283 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 NPIPB5A8MRT5 1133 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 SLC25A20O43772 301 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 PRR31Q5SQ13 230 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 C10orf55Q5SWW7 151 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 TMEM219Q86XT9 240 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 CSRP1P21291 193 aaKnown RBP14.73□□□□□ -0.05
EXTL3-201ENST00000220562 ZNF672Q499Z4 452 aaPredicted RBP14.73□□□□□ -0.05
EXTL3-201ENST00000220562 METRNQ9UJH8 293 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 A0A1B0GV72 72 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 TIMP3P35625 211 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 GAS1P54826 345 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 FOXL1Q12952 345 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 CD177Q8N6Q3 437 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 MBD3L1Q8WWY6 194 aa14.73□□□□□ -0.05
EXTL3-201ENST00000220562 F2Z2F3 143 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 ZNF815PA8K554 130 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 ADARB2-AS1A8MUL3 147 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 PLSCR4Q9NRQ2 329 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 LINC00587B1AMM8 73 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 CRPP02741 224 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 CLPSP04118 112 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 IGHV1-8P0DP01 117 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 EXOC3-AS1Q8N2X6 119 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 MGST2Q99735 147 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 SCRT1Q9BWW7 348 aa14.72□□□□□ -0.05
EXTL3-201ENST00000220562 HEPN1Q6WQI6 88 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 GGTLC1Q9BX51 225 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 C11orf68Q9H3H3 251 aaKnown RBP14.71□□□□□ -0.05
EXTL3-201ENST00000220562 GREB1Q4ZG55 1949 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 IGHV1-3A0A0C4DH29 117 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 PPBPP02775 128 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.05
EXTL3-201ENST00000220562 PMS2P5A8MQ11 134 aa14.71□□□□□ -0.05
EXTL3-201ENST00000220562 SLC25A39Q9BZJ4 359 aaPredicted RBP14.71□□□□□ -0.06
EXTL3-201ENST00000220562 IGHV3-73A0A0B4J1V6 119 aa14.71□□□□□ -0.06
EXTL3-201ENST00000220562 TRAV3A0A0B4J244 114 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms