RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RNF224P0DH78 156 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 AJUBAQ96IF1 538 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 PIMREGQ9BSJ6 248 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 IGHV3-21A0A0B4J1V1 117 aa23.54■■□□□ 1.36
PABPN1-201ENST00000216727 OR10J4P0C629 311 aa23.54■■□□□ 1.36
PABPN1-201ENST00000216727 FLNCQ14315 2725 aa23.54■■□□□ 1.36
PABPN1-201ENST00000216727 PLP1P60201 277 aa23.54■■□□□ 1.36
PABPN1-201ENST00000216727 FAM168AQ92567 244 aa23.54■■□□□ 1.36
PABPN1-201ENST00000216727 NDUFS8O00217 210 aa23.53■■□□□ 1.36
PABPN1-201ENST00000216727 UBE2L3P68036 154 aaKnown RBP23.53■■□□□ 1.36
PABPN1-201ENST00000216727 USP9XQ93008 2570 aaPredicted RBP23.53■■□□□ 1.36
PABPN1-201ENST00000216727 C9JCJ5 164 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 IGLC1P0CG04 106 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 TMEM11P17152 192 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 CX3CL1P78423 397 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 LINC00305Q7Z4B0 112 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 PERPQ96FX8 193 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 OR5B12Q96R08 314 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 NCBP2LA6PVI3 153 aaKnown RBP23.52■■□□□ 1.36
PABPN1-201ENST00000216727 TGOLN2O43493 480 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 FAM106CPP0CH98 169 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 C10orf105Q8TEF2 133 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 PYGO2Q9BRQ0 406 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 PAXXQ9BUH6 204 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 LY96Q9Y6Y9 160 aa23.52■■□□□ 1.36
PABPN1-201ENST00000216727 NPIPB5A8MRT5 1133 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 GGTLC3B5MD39 225 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 K7EIM0 57 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 S100A6P06703 90 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 GALR1P47211 349 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 STXBP6Q8NFX7 210 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 ARPC1AQ92747 370 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 FAM103A1Q9BTL3 118 aaKnown RBP23.51■■□□□ 1.35
PABPN1-201ENST00000216727 COL12A1Q99715 3063 aa23.51■■□□□ 1.35
PABPN1-201ENST00000216727 C5orf52A6NGY3 159 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 ORM2P19652 201 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 S100PP25815 95 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 SAA4P35542 130 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 OR51M1Q9H341 326 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 PPP1R2P9O14990 202 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 OR5T1Q8NG75 326 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 OR1B1Q8NGR6 318 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 ASH1LQ9NR48 2969 aaKnown RBP23.5■■□□□ 1.35
PABPN1-201ENST00000216727 C1RLQ9NZP8 487 aa23.5■■□□□ 1.35
PABPN1-201ENST00000216727 VWC2LB2RUY7 222 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 HYPMO75409 117 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 BRS3P32247 399 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 RPL35P42766 123 aaKnown RBP23.49■■□□□ 1.35
PABPN1-201ENST00000216727 SNRPEP62304 92 aaKnown RBP23.49■■□□□ 1.35
PABPN1-201ENST00000216727 PGPEP1LA6NFU8 196 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 PAX8Q06710 450 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 OCC1Q8TAD7 63 aa23.49■■□□□ 1.35
PABPN1-201ENST00000216727 BBC3Q96PG8 261 aaPredicted RBP23.49■■□□□ 1.35
PABPN1-201ENST00000216727 SRP14P37108 136 aaKnown RBP23.48■■□□□ 1.35
PABPN1-201ENST00000216727 ASPHD1Q5U4P2 390 aa23.48■■□□□ 1.35
PABPN1-201ENST00000216727 AURKAIP1Q9NWT8 199 aaPredicted RBP23.48■■□□□ 1.35
PABPN1-201ENST00000216727 PRB1P04280 392 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 PYYP10082 97 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 CRYBB3P26998 211 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 SUMO1P63165 101 aaKnown RBP23.47■■□□□ 1.35
PABPN1-201ENST00000216727 TTC9CQ8N5M4 171 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 FXYD5Q96DB9 178 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 SFRP2Q96HF1 295 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 IGHV4-61A0A0C4DH41 118 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 NPFFO15130 113 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 NDPQ00604 133 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 CLEC2AQ6UVW9 174 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 NECAP1Q8NC96 275 aa23.47■■□□□ 1.35
PABPN1-201ENST00000216727 GSX1Q9H4S2 264 aaPredicted RBP23.47■■□□□ 1.35
PABPN1-201ENST00000216727 RASL11BQ9BPW5 248 aa23.46■■□□□ 1.35
PABPN1-201ENST00000216727 HELTA6NFD8 242 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 PSG1P11464 419 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 ATP5J2P56134 94 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 Q8N9W7 124 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 IMMP2LQ96T52 175 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 ELOVL1Q9BW60 279 aa23.45■■□□□ 1.35
PABPN1-201ENST00000216727 ABCA1O95477 2261 aa23.45■■□□□ 1.34
PABPN1-201ENST00000216727 CENPVL3A0A0U1RRI6 287 aa23.45■■□□□ 1.34
PABPN1-201ENST00000216727 IGKV1-17P01599 117 aa23.45■■□□□ 1.34
PABPN1-201ENST00000216727 IGLV11-55A0A075B6I3 123 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 MDFIC2A0A1B0GVS7 189 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 UBE2CO00762 179 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 FABP1P07148 127 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 FAM120AOSQ5T036 256 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 PIP4P2Q8N4L2 257 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 RBM14Q96PK6 669 aaKnown RBP23.44■■□□□ 1.34
PABPN1-201ENST00000216727 FANCD2OSQ96PS1 177 aa23.44■■□□□ 1.34
PABPN1-201ENST00000216727 MYO18BQ8IUG5 2567 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 GGCTO75223 188 aaKnown RBP23.43■■□□□ 1.34
PABPN1-201ENST00000216727 HLA-DRB1P01911 266 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 TIGITQ495A1 244 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 TEX38Q6PEX7 206 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 TRGC2P03986 189 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 KCNIP4Q6PIL6 250 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 SRD5A3Q9H8P0 318 aa23.43■■□□□ 1.34
PABPN1-201ENST00000216727 IGHV7-81A0A0B4J1V7 117 aa23.42■■□□□ 1.34
PABPN1-201ENST00000216727 AP4M1O00189 453 aa23.42■■□□□ 1.34
PABPN1-201ENST00000216727 TCEAL7Q9BRU2 100 aa23.42■■□□□ 1.34
PABPN1-201ENST00000216727 HIGD1AQ9Y241 93 aa23.42■■□□□ 1.34
PABPN1-201ENST00000216727 ZNF48Q96MX3 618 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms