RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 TRAV40A0A0B4J280 105 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 COX7A2P2O60397 106 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 IGLC1P0CG04 106 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 EGR2P11161 476 aaPredicted RBP14.67□□□□□ -0.06
CTSA-201ENST00000191018 ATF4P18848 351 aaPredicted RBP14.67□□□□□ -0.06
CTSA-201ENST00000191018 BPIFB3P59826 476 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 OR51G1Q8NGK1 321 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 FANCD2OSQ96PS1 177 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 SVEP1Q4LDE5 3571 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 A0A096LNT2 108 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 B4DSR2 109 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 KIAA0141Q14154 515 aaPredicted RBP14.67□□□□□ -0.06
CTSA-201ENST00000191018 TMEM241Q24JQ0 296 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 ZNF674Q2M3X9 581 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 C10orf113Q5VZT2 155 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 ISOC2Q96AB3 205 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 SLC25A2Q9BXI2 301 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 DOK5Q9P104 306 aa14.67□□□□□ -0.06
CTSA-201ENST00000191018 IGLV11-55A0A075B6I3 123 aa14.66□□□□□ -0.06
CTSA-201ENST00000191018 ELOA3CA0A087WX78 387 aaPredicted RBP14.66□□□□□ -0.06
CTSA-201ENST00000191018 PLP1P60201 277 aa14.66□□□□□ -0.06
CTSA-201ENST00000191018 YPEL4Q96NS1 127 aa14.66□□□□□ -0.06
CTSA-201ENST00000191018 CELSR2Q9HCU4 2923 aa14.66□□□□□ -0.06
CTSA-201ENST00000191018 IGHV3OR16-10A0A075B7F0 116 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 OR7C2O60412 319 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 RASL11BQ9BPW5 248 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 MEGF9Q9H1U4 602 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 GSX1Q9H4S2 264 aaPredicted RBP14.65□□□□□ -0.06
CTSA-201ENST00000191018 ZNF355PQ9NSJ1 428 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 TRAV5A0A0B4J249 113 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 IGHV4-38-2P0DP08 117 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 COL8A1P27658 744 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 BRD3OSQ6XYD6 125 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 HIST1H2BAQ96A08 127 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 UHRF2Q96PU4 802 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 HSPB9Q9BQS6 159 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 C7orf69Q9H7B7 122 aa14.65□□□□□ -0.06
CTSA-201ENST00000191018 LOC105371267A0A1B0GV96 52 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 NDUFB4O95168 129 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 OR2C1O95371 312 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 KRTAP10-9P60411 292 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 RPL23P62829 140 aaKnown RBP14.64□□□□□ -0.07
CTSA-201ENST00000191018 KLF17Q5JT82 389 aaPredicted RBP14.64□□□□□ -0.07
CTSA-201ENST00000191018 PIFOQ8TCI5 191 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 C11orf52Q96A22 123 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 RBM14Q96PK6 669 aaKnown RBP14.64□□□□□ -0.07
CTSA-201ENST00000191018 TMEM242Q9NWH2 141 aa14.64□□□□□ -0.07
CTSA-201ENST00000191018 CXorf65A6NEN9 183 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 IGKV1-17P01599 117 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 MT-ND4LP03901 98 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 GATA3P23771 443 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 LINC00305Q7Z4B0 112 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 OR5AU1Q8NGC0 362 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 HIF1ANQ9NWT6 349 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 KMT2BQ9UMN6 2715 aaPredicted RBP14.63□□□□□ -0.07
CTSA-201ENST00000191018 TRAV20A0A0B4J274 112 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 A0A0U1RQK1 487 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 SCO2A0A1W2PP80 73 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 ORM2P19652 201 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 SGMS2Q8NHU3 365 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 ZNF48Q96MX3 618 aaPredicted RBP14.63□□□□□ -0.07
CTSA-201ENST00000191018 DERL1Q9BUN8 251 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 ABCA1O95477 2261 aa14.63□□□□□ -0.07
CTSA-201ENST00000191018 ANKRD17O75179 2603 aaKnown RBP14.63□□□□□ -0.07
CTSA-201ENST00000191018 OR10J4P0C629 311 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 PSG1P11464 419 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 FOLR2P14207 255 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 KLK9Q2XQG4 91 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 FAM24BQ8N5W8 94 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 C5orf56Q8N8D9 126 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 OR1B1Q8NGR6 318 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 KLK9Q9UKQ9 250 aa14.62□□□□□ -0.07
CTSA-201ENST00000191018 A0A1W2PRE2 83 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 HYPMO75409 117 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 CRYBA1P05813 215 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 ADIRFQ15847 76 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 TIGITQ495A1 244 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 CSMD1Q96PZ7 3565 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 CSMD2Q7Z408 3487 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.61□□□□□ -0.071e-7■■■□□ 17.5
CTSA-201ENST00000191018 UBE2L3P68036 154 aaKnown RBP14.61□□□□□ -0.07
CTSA-201ENST00000191018 RNF212Q495C1 297 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 PAXXQ9BUH6 204 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 CTDSP1Q9GZU7 261 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 OR51M1Q9H341 326 aa14.61□□□□□ -0.07
CTSA-201ENST00000191018 BEX4Q9NWD9 120 aaPredicted RBP14.61□□□□□ -0.07
CTSA-201ENST00000191018 GGTLC3B5MD39 225 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 ATP6V0E1O15342 81 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 AVPP01185 164 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 LINC01356Q8N9X3 169 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 OR5T1Q8NG75 326 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 FAM110DQ8TAY7 271 aaPredicted RBP14.6□□□□□ -0.07
CTSA-201ENST00000191018 THYN1Q9P016 225 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 PRELID1Q9Y255 219 aa14.6□□□□□ -0.07
CTSA-201ENST00000191018 TRBV20OR9-2A0A075B6H5 130 aa14.59□□□□□ -0.07
CTSA-201ENST00000191018 F8W735 103 aaPredicted RBP14.59□□□□□ -0.07
CTSA-201ENST00000191018 PYYP10082 97 aa14.59□□□□□ -0.07
CTSA-201ENST00000191018 ELOBQ15370 118 aa14.59□□□□□ -0.07
CTSA-201ENST00000191018 LINC01551Q86U37 167 aa14.59□□□□□ -0.07
CTSA-201ENST00000191018 STXBP6Q8NFX7 210 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms