RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm20830J3KML6 227 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Crisp3Q03402 241 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ms4a3Q920C4 213 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ly96Q9JHF9 160 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Plp1P60202 277 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ikzf4Q8C208 586 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr934Q9EQ87 310 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1331K7N684 317 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Hoxa3P02831 443 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Klrc3Q9QXN7 221 aa14.57□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1191-ps1A0A1L1STD5 311 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Klf16P58334 251 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 GhitmQ91VC9 346 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Mmp16Q9WTR0 607 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Efnb2P52800 336 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr874Q7TRE6 310 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Atg4dQ8BGV9 474 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr822Q8VFU1 312 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Slc25a10Q9QZD8 287 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Bcl2l2P70345 193 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Insl6Q9QY05 191 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gm26920S4R2A5 56 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ascl4M0QW46 144 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tbx6P70327 436 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1329L7MTV4 313 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Foxd2O35392 492 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Fscn3Q9QXW4 498 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Dhrs13Q5SS80 376 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 AfmidQ8K4H1 305 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rhbdd2Q8VEK2 361 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Kiss1rQ91V45 396 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Wnt16Q9QYS1 364 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Btg2Q04211 158 aa14.56□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Trav5d-4Q5R1F6 114 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rtn4rl1Q8K0S5 445 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Eva1aQ91WM6 156 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Dynlrb2Q9DAJ5 96 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Nup210lQ9D2F7 1881 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Slc18b1D3Z5L6 459 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Scmh1Q8K214 706 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Cst7O89098 144 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rbpms2Q8VC52 206 aaKnown RBP14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1392Q8VFA6 311 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ear10Q923L6 156 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Vmn1r181Q0P547 304 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1259Q8VEZ1 309 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Brca1P48754 1812 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Wnt2bO70283 389 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr632Q9EPN9 317 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Igkv17-127A0A0G2JDN5 117 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 MyadmO35682 320 aaKnown RBP14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Fcn2O70497 314 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 CtgfP29268 348 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rhebl1Q9D8T3 184 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Fzd5Q9EQD0 585 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Cd209gD3Z5D4 194 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rdh16O54909 317 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Mrpl18Q9CQL5 180 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rcc1Q8VE37 421 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Srsf4Q8VE97 489 aaKnown RBP14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tmem179bQ9CY24 219 aa14.55□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Samt3A2ARK7 233 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Mfge8P21956 463 aaKnown RBP14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Mrpl33Q9CQP0 65 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Trav17A0A075B655 113 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1131Q7TR45 309 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Aqp3Q8R2N1 292 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1002Q8VFK2 318 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Cacng8Q8VHW2 423 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Defa24Q5G865 93 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ceacam9Q78T27 234 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gm5741B2RVA4 72 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gpr6Q6YNI2 363 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Rnd1Q8BLR7 232 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 C1sbQ8CFG8 688 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Plscr2Q9DCW2 307 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Zfp433A0A0J9YUD4 600 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ctxnd2A0A1B0GQX3 59 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gm32687A0A1W2P6H7 600 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 SiglechB7ZMQ6 332 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Msl2Q69ZF8 577 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr365Q8VFT2 312 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ajm1A2AJA9 974 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 SepsecsQ6P6M7 504 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1038Q8VGS1 319 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ighv9-2A0A0B4J1J4 117 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Znf48Q3US17 591 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ccsmst1Q6RUT7 136 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Syt11Q9R0N3 430 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 NpffQ9WVA8 114 aa14.54□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tmem240B2RWJ3 173 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gpbar1Q80SS6 329 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Vmn1r233Q8R294 319 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1441Q8VFV3 318 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tmem230Q8CIB6 120 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Jmjd1cQ69ZK6 2350 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Pusl1A2ADA5 291 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Xaf1Q5NBU8 273 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Nhsl1Q8CAF4 1587 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 P06323 132 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms