RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 LINC00869P0C866 280 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 STPG3Q8N7X2 389 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 NPIPB3Q92617 1050 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 CUBNO60494 3623 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 RAB19A4D1S5 217 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 GATA2P23769 480 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-232ENST00000641947 OR10J1P30954 320 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 RND2P52198 227 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 PRR20EP86478 221 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 PRR20CP86479 221 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 PRR20DP86480 221 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 PRR20BP86481 221 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 PRR20AP86496 221 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 TTC9CQ8N5M4 171 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 NANPQ8TBE9 248 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 ZNF48Q96MX3 618 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-232ENST00000641947 FANCD2OSQ96PS1 177 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
PHGDH-232ENST00000641947 SONP18583 2426 aaKnown RBP13.84□□□□□ -0.19
PHGDH-232ENST00000641947 K7EIM0 57 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 IGHV4-59P01825 116 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-232ENST00000641947 BPIFB3P59826 476 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 THAP8Q8NA92 274 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 LINC00052Q96N35 136 aa13.83□□□□□ -0.19
PHGDH-232ENST00000641947 IGLV11-55A0A075B6I3 123 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
PHGDH-232ENST00000641947 M6PRP20645 277 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 RPL29P47914 159 aaKnown RBP13.83□□□□□ -0.2
PHGDH-232ENST00000641947 B2MP61769 119 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 DEFA5Q01523 94 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 FAM122CQ6P4D5 195 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 BPIFCQ8NFQ6 507 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 OR5T1Q8NG75 326 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 SGMS2Q8NHU3 365 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 MBD3L1Q8WWY6 194 aa13.83□□□□□ -0.2
PHGDH-232ENST00000641947 CORTO00230 105 aa13.82□□□□□ -0.2
PHGDH-232ENST00000641947 IL17RELQ6ZVW7 336 aa13.82□□□□□ -0.2
PHGDH-232ENST00000641947 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-232ENST00000641947 SLC39A9Q9NUM3 307 aa13.82□□□□□ -0.2
PHGDH-232ENST00000641947 NUDT19A8MXV4 375 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 C9JQL5 133 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 G3V318 75 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 MBP02144 154 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 ZNF90Q03938 601 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 ECSCRQ19T08 205 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 Q6ZS46 218 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 TRAV1-1A0A0B4J248 108 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 SEC14L6B5MCN3 397 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 IER3P46695 156 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 ACOT6Q3I5F7 207 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-232ENST00000641947 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
PHGDH-232ENST00000641947 BLCAPP62952 87 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 RAB31Q13636 194 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 SPATA31B1PQ5VZV4 182 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 CYP2G1PQ6ZSU1 146 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 S4R3C0 116 aa13.8□□□□□ -0.2
PHGDH-232ENST00000641947 CTXND1A0A1B0GTU2 59 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 CD5P06127 495 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 CDC34P49427 236 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-232ENST00000641947 C19orf54Q5BKX5 351 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 UQCC3Q6UW78 93 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 FAM110DQ8TAY7 271 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-232ENST00000641947 TMUB1Q9BVT8 246 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 KCNIP2Q9NS61 270 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
PHGDH-232ENST00000641947 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 ZFP92A6NM28 416 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 SOX15O60248 233 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 GUK1Q16774 197 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 C9orf152Q5JTZ5 239 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 RARRES2Q99969 163 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 ACTR3CQ9C0K3 210 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-232ENST00000641947 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 SEPSECSQ9HD40 501 aaKnown RBP13.78□□□□□ -0.2
PHGDH-232ENST00000641947 NOTCH2Q04721 2471 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 NDUFB8O95169 186 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 ADCYAP1P18509 176 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 ZP3P21754 424 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 Q6YL49 198 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 TNFRSF19Q9NS68 423 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 PITPNC1Q9UKF7 332 aa13.78□□□□□ -0.2
PHGDH-232ENST00000641947 BTBD17A6NE02 478 aa13.77□□□□□ -0.21
PHGDH-232ENST00000641947 F8W735 103 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms