RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ABCA2Q9BZC7 2435 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 CNIH1O95406 144 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 CD24P25063 80 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 BRS3P32247 399 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 CDC34P49427 236 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-216ENST00000641375 HAGHQ16775 308 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 ZNF506Q5JVG8 444 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
PHGDH-216ENST00000641375 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 CORTO00230 105 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 FCN1O00602 326 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 NPFFO15130 113 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 TCAPO15273 167 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 IFNA1P01562 189 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 FAM106CPP0CH98 169 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 FGF8P55075 233 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-216ENST00000641375 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 PVRIGQ6DKI7 326 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 OR1P1Q8NH06 330 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 RAB24Q969Q5 203 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 CENPVL3A0A0U1RRI6 287 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 A0A1W2PPV4 95 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 C7orf77A4D0Y5 90 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
PHGDH-216ENST00000641375 REG1AP05451 166 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-216ENST00000641375 Q8N6K4 173 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
PHGDH-216ENST00000641375 IFITM10A6NMD0 228 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 TSTD3H0UI37 97 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 YIF1AO95070 293 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 AREGP15514 252 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 TMEM11P17152 192 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 AWAT1Q58HT5 328 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 CHD6Q8TD26 2715 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 MSMBP08118 114 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 BCL2P10415 239 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 RAB4AP20338 218 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 PRR20EP86478 221 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 PRR20CP86479 221 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 PRR20DP86480 221 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 PRR20BP86481 221 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 PRR20AP86496 221 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 ICAM4Q14773 271 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
PHGDH-216ENST00000641375 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
PHGDH-216ENST00000641375 IGKV1OR2-108A0A075B7D4 117 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 LOC102723971A0A1B0GUV8 181 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 ZFP92A6NM28 416 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
PHGDH-216ENST00000641375 B4DSR2 109 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 TAGLN2P37802 199 aaKnown RBP13.09□□□□□ -0.31
PHGDH-216ENST00000641375 RHEBQ15382 184 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 MLANAQ16655 118 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 FNDC4Q9H6D8 234 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-216ENST00000641375 SLC45A2Q9UMX9 530 aa13.09□□□□□ -0.31
PHGDH-216ENST00000641375 ANKRD17O75179 2603 aaKnown RBP13.09□□□□□ -0.31
PHGDH-216ENST00000641375 FXYD3Q14802 87 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 AKIRIN2Q53H80 203 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 OR2T6Q8NHC8 308 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 ACY3Q96HD9 319 aa13.08□□□□□ -0.31
PHGDH-216ENST00000641375 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
PHGDH-216ENST00000641375 APELAP0DMC3 54 aa13.08□□□□□ -0.32
PHGDH-216ENST00000641375 KIAA0141Q14154 515 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-216ENST00000641375 ZNF562Q6V9R5 426 aa13.08□□□□□ -0.32
PHGDH-216ENST00000641375 ABHD5Q8WTS1 349 aa13.08□□□□□ -0.32
PHGDH-216ENST00000641375 C22orf15Q8WYQ4 148 aa13.08□□□□□ -0.32
PHGDH-216ENST00000641375 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-216ENST00000641375 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
PHGDH-216ENST00000641375 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 GATA3P23771 443 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 COL8A1P27658 744 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 OR10J1P30954 320 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 AKR1C3P42330 323 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 ISOC2Q96AB3 205 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 MISP3Q96FF7 219 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 MANBALQ9NQG1 85 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 BEX4Q9NWD9 120 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-216ENST00000641375 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 CELSR2Q9HCU4 2923 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
PHGDH-216ENST00000641375 PSMB3P49720 205 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 RHOBP62745 196 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 FBLN7Q53RD9 439 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 SOHLH1Q5JUK2 328 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms