RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 RAB13P51153 203 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 RBX1P62877 108 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 PDPNQ86YL7 162 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 TEX45Q8NA69 505 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 SGK494Q96LW2 274 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 COMMD9Q9P000 198 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 HIVEP2P31629 2446 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
SCARB2-220ENST00000640076 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1B0GV90 55 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 DUXBA0A1W2PPF3 345 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 MPTX1A8MV57 137 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 H7C2Y5 167 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 SIX6O95475 246 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 HPRT1P00492 218 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 VDAC1P21796 283 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 H2BFSP57053 126 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 LINC01620Q4KN68 170 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 NMSQ5H8A3 153 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 SEC22AQ96IW7 307 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
SCARB2-220ENST00000640076 A0A0G2JRQ6 117 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1B0GV72 72 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 VENTXO95231 258 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 KRASP01116 189 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 IFNA21P01568 189 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 G6PCP35575 357 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 AKR1C2P52895 323 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 EXOSC2Q13868 293 aaKnown RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 H2BFWTQ7Z2G1 175 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 OR4C13Q8NGP0 309 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 OSR1Q8TAX0 266 aaPredicted RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 MRAPQ8TCY5 172 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 LSM10Q969L4 123 aaKnown RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 FLYWCH2Q96CP2 140 aaKnown RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 CXorf58Q96LI9 332 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 NEURL2Q9BR09 285 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF436Q9C0F3 470 aaPredicted RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 NUP50Q9UKX7 468 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 SOX21Q9Y651 276 aaPredicted RBP6.34□□□□□ -1.39
SCARB2-220ENST00000640076 F8P00451 2351 aa6.34□□□□□ -1.39
SCARB2-220ENST00000640076 PLXNB1O43157 2135 aa6.34□□□□□ -1.4
SCARB2-220ENST00000640076 SRRM4A7MD48 611 aaKnown RBP6.33□□□□□ -1.4
SCARB2-220ENST00000640076 ATG12O94817 140 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 OR2A4O95047 310 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 NBEAP1P0C6P0 100 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 P0C879 139 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 ZNF415Q09FC8 603 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 FOXE3Q13461 319 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 POU2AF1Q16633 256 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 GSG1LQ6UXU4 331 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 VKORC1L1Q8N0U8 176 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 ST6GAL2Q96JF0 529 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 RITA1Q96K30 269 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 OR10C1Q96KK4 312 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 MAST4O15021 2626 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 HRASP01112 189 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 IGKV1D-33P01593 117 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 IGKV1-33P01594 117 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 FBP1P09467 338 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 CD24P25063 80 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 BRS3P32247 399 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 ERVK-16P61578 105 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 SSBP2P81877 361 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-220ENST00000640076 SRSF4Q08170 494 aaKnown RBP6.33□□□□□ -1.4
SCARB2-220ENST00000640076 CD300CQ08708 224 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 IAH1Q2TAA2 248 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-220ENST00000640076 FAM120AOSQ5T036 256 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 C9orf139Q6ZV77 190 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 MMD2Q8IY49 270 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 DMBX1Q8NFW5 382 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 GPR146Q96CH1 333 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 FAM210BQ96KR6 192 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 C2orf50Q96LR7 162 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 SMR3AQ99954 134 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 CHIAQ9BZP6 476 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
SCARB2-220ENST00000640076 NSD1Q96L73 2696 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-220ENST00000640076 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 A0A1B0GU03 582 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 CYSRT1A8MQ03 144 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 M0R036 132 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 GPR137BO60478 399 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 MOSP00540 346 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 IGLV2-23P01705 113 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 GIPP09681 153 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-220ENST00000640076 SLC25A6P12236 298 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 S100PP25815 95 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 LGALS7P47929 136 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 DYNLT3P51808 116 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 RAB31Q13636 194 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 EBI3Q14213 229 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 GCSAMLQ5JQS6 135 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 OR4A47Q6IF82 309 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 Q75L30 129 aa6.32□□□□□ -1.4
SCARB2-220ENST00000640076 TEX29Q8N6K0 151 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms